| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3598 |
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| Symbol | |
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| ID | 3936073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3674269 |
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| End bp | 3675432 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905973 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_511540 |
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| Protein GI | 89056089 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCCA TCACCGAGAT CGAAGACCTT AAGCGGATCT ACAAGCGCCG TGTCCCAAAG
ATGTTCTACG ATTATGCGGA ATCGGGCAGT TGGACGGAGC AAACGTTCCG TGAAAATTCC
TCGGATTTCG ACCTGATCCG CCTGCGCCAA CGCATCGCGC GGGATATGGC CGGGCGGACG
ACAGCGGGCA AGATGGTTGG CCAGGAGGTC TCCATGCCAG TCGCCCTTGC GCCCGTGGGC
CTCACTGGCA TGCAATCGGC CGATGGAGAG ATTAAGGCCG CCCGCGCGGC AGAGCGGTTT
GGCGTGCCTT ACACATTGTC GACCATGTCC ATCTGCTCCA TCGAAGATGT GGCCGAGCAT
ACGCAGAAGC CGTTCTGGTT TCAGGTCTAC ACGCTCAAGG ACGACGATTT CATGAAGCGC
CTGTTTGCCC GGGCGAAGGA CGCGAAGTGC CATGCCCTGG TGATCACCGT GGACCTCCAG
ATCATGGGGC AGCGGCACAA GGACATCAAA AATGGCCTCT CTGCCCCGCC CAAACTGACG
GTCAAATCCA TCGCCAACAT GGCCACCAAA GTGCCCTGGG GGATGGAGAT GTTGGGCACC
AAACGCCGGT TCTTCGGCAA TATCGTGGGT CACGCGGCTG GTGTGACGGA CCCCGGATCG
CTTAGCTCCT GGACGGCGGA GGCATTTGAT CCCTCACTCA ATTGGGAGCG GATCAAGGAG
TTCCGCAGTT GGTGGGATGG CCCCGTGATC CTGAAAGGCA TCTTGGATGT CGAGGATGCG
AAAGAGGCGA TAAATGTGGG CGCGGACGCG ATTGTCGTGT CAAACCACGG CGGGCGGCAA
TTGGACGGTG CGCTAAGTTC CATCCGGATG CTGCCGCAGA TCATGGATGC GGTCGGGGAC
AAGATCGAGG TTCATCTCGA TAGTGGTATT CGCTCCGGAC AGGACGTGTT GAAAGCGCTG
GCCATGGGGG CCACAGGCAC GATGATCGGG CGGGCCTATG TGTACGGCCT TGGGGCCAGA
GGTCAGCAGG GTGTCACGGA CGCGTTGGAG GTGATCCAGA AGGAGCTGTC GACCTCCATG
GGCCTGTGTG GTGAGCGGGA CGTTGCCAAC CTCAGTCGCG CCAACCTTTT GATCCCGAAG
GGATTTCAGG GGGATTGGGA GTAA
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| Protein sequence | MPPITEIEDL KRIYKRRVPK MFYDYAESGS WTEQTFRENS SDFDLIRLRQ RIARDMAGRT
TAGKMVGQEV SMPVALAPVG LTGMQSADGE IKAARAAERF GVPYTLSTMS ICSIEDVAEH
TQKPFWFQVY TLKDDDFMKR LFARAKDAKC HALVITVDLQ IMGQRHKDIK NGLSAPPKLT
VKSIANMATK VPWGMEMLGT KRRFFGNIVG HAAGVTDPGS LSSWTAEAFD PSLNWERIKE
FRSWWDGPVI LKGILDVEDA KEAINVGADA IVVSNHGGRQ LDGALSSIRM LPQIMDAVGD
KIEVHLDSGI RSGQDVLKAL AMGATGTMIG RAYVYGLGAR GQQGVTDALE VIQKELSTSM
GLCGERDVAN LSRANLLIPK GFQGDWE
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