| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3597 |
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| Symbol | |
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| ID | 3936072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3673124 |
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| End bp | 3674287 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637905972 |
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| Product | major facilitator transporter |
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| Protein accession | YP_511539 |
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| Protein GI | 89056088 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.851404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGG TTGCACCCAT GTCGATCCTG TCCGCCCTGT CCCTGTCCCG CCGTCCACTG
GTCGCCTTCA TGATTGTAGG CACCTTCTGG GGCTGCTTTG CGGCGCAGGT TCCCGTCCTG
AAGGCAGGAA TTGGCGCAAC GGATGCGCTG TTCGGCCTTG TTCTTCTGGG GACGTCGGTA
GGCTTGATCA CCACGATGTG GCTGGCCCCC CTGTTTGACC GCTGGTTGGG CGCATGGGCC
ATGCCTGTGG CCGGATGTAT CTTCGCTGCC GTAGCGCTTG GCCCGTCGCT GGCGGGCTCT
CCCTGGATGT TCTTTGTCGC CATGGTTTTG GCGGGTTATT GCTCGGGCAT CCTCGACGTC
GTGATGAATG CGCGCGTGTC CGAGTTGGAG GCCCGCCACG ACCGCAGCCT GATGAACGCC
AATCACGCCA TGTTCTCCGT GGCCTACGCG ATCTCTGCCG TGATGACCGG CGTCGCACGG
GAGGCGGGGT GGGATCCGGT CCAGATCTTC AGTGTCGTGG CTGTGTTGAT CGCGGCCATG
GCCGTGGGTC TGCGGATGGA GGTGGAGCCT ATTGATGAGA CCGCACGCCG CGCCAACCGG
TTCCCTTGGG GCGTCGTTCT GGTCTGTGGT GGCATCGTTT TGGCCGCGTT CTTTGTGGAG
GCGACCGTGG AGGCCTGGTC AGCGCTTCAT ATTGAGCGGA CCTTGGGCGG GCGGGCTGCG
GAAGGCGCGC TGGGACCCGC CGTTCTGGGC CTGACCATGG CGATTGGCCG GTTCTCGGGC
CAGGCCCTGA CGGAACGGTT TTCCGAGCAT GCAATCATCG TGATCGGAAC AGGCATGGCA
AGCGTCGGGG CATTAATCGC AGCGGCGGCC GGAACGCCAC TGATGGCTTA CATAGGCTTC
GGGGCCATGG GCTTGGGGAT CGCCGCCGTG GGGCCGGTTG GGCTTGCCAT CGTTGGGCGG
ATGGTACGAC CCGAGCACCG GACAGCCGCT GTGGCACGGG CGGCTGTGAT CGGTTTCATG
GGCTTTGTGC TGGCGCCGTC ACTCATGGGG TTCGTCTCTG GTGCGGTCGG TTTGCGGTGG
GCCTTTGCCG CTGTCGCGGC GGCGGCCCTC CTCGCTCCGC TCCTCGCAGC CTATCTGCGG
CGGACTTACT CCCAATCCCC CTGA
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| Protein sequence | MTAVAPMSIL SALSLSRRPL VAFMIVGTFW GCFAAQVPVL KAGIGATDAL FGLVLLGTSV
GLITTMWLAP LFDRWLGAWA MPVAGCIFAA VALGPSLAGS PWMFFVAMVL AGYCSGILDV
VMNARVSELE ARHDRSLMNA NHAMFSVAYA ISAVMTGVAR EAGWDPVQIF SVVAVLIAAM
AVGLRMEVEP IDETARRANR FPWGVVLVCG GIVLAAFFVE ATVEAWSALH IERTLGGRAA
EGALGPAVLG LTMAIGRFSG QALTERFSEH AIIVIGTGMA SVGALIAAAA GTPLMAYIGF
GAMGLGIAAV GPVGLAIVGR MVRPEHRTAA VARAAVIGFM GFVLAPSLMG FVSGAVGLRW
AFAAVAAAAL LAPLLAAYLR RTYSQSP
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