| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3596 |
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| Symbol | |
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| ID | 3936071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3672330 |
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| End bp | 3672980 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905971 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_511538 |
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| Protein GI | 89056087 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.782484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGTG AGATTCCTGA TCTTATCGCT GAGGCACGGA CGGGGACAGG CAAGGGGGCC
GCTCGTCAAG CACGCCGTGA AGGTAACGTG CCCGGTATCG TTTATGGCGG CGGCATCGAT
CCGCTTGCGA TCAATATCCC CTTCAACGTT CTGCTCAAGC GCCTGAAAGA CGGTCGCTTT
CTGTCGACGC TCTTCAACAT GAAGGTCGAA GGCCAGGACG ATGTCCGCGT GATCTGCCGC
AATGTGCAGC GCGATGTCGT CAAGGATCTG CCGACGCATG TCGATTTCAT GCGTCTGAAG
CGGACCTCGA AGATCGCACT CTTCATCCCC GTCGAAGTGA TTGGCGAAGA GGAATGCCCC
GGCCTCAAGA AGGGCGGTGT GTTGACCATG GTCCGCCCCG AGGTGGAGCT GCGCGTGACC
GCAGGCGATA TCCCCGAGCA GATCACCATT GATCTGACGG GCCTTGAGAT TGGCGACACC
GTCACGATCA GCTCGGTCGA GCTGCCCGCT GGCGCGAAGG CCACCATCGA CCGCGATTTC
GTGATCGCCA ATCTGACAGC GCCGTCCGGC CTTGTCAGCG CCGAGAGCGA AGAGGACGAA
GACGCCCCGG CGGCCGACGA AGTTCCCGCA ACTGAGGTCA GCGAAGAGTA A
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| Protein sequence | MAGEIPDLIA EARTGTGKGA ARQARREGNV PGIVYGGGID PLAINIPFNV LLKRLKDGRF
LSTLFNMKVE GQDDVRVICR NVQRDVVKDL PTHVDFMRLK RTSKIALFIP VEVIGEEECP
GLKKGGVLTM VRPEVELRVT AGDIPEQITI DLTGLEIGDT VTISSVELPA GAKATIDRDF
VIANLTAPSG LVSAESEEDE DAPAADEVPA TEVSEE
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