| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3574 |
|---|
| Symbol | |
|---|
| ID | 3936049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3646126 |
|---|
| End bp | 3649548 |
|---|
| Gene Length | 3423 bp |
|---|
| Protein Length | 1140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637905949 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_511516 |
|---|
| Protein GI | 89056065 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCG CTGCGCAATC ATGTGCCGGT GATGCGCGGC TGATCGACGG GGTCTGCCTG
CCGGCAATTT CTGCGCCGGG TCCGCGTATC GAGAATGTGC CGACAGGTTT TGTGATCTCG
CTGGATGGCG AGGTGTTCGA GGGCGATGAT GAGGTCCGTG ACCTTGTGCG CCGCACGGAT
GTCCGCCTGG CCAATGCGGA TATCGAAGTC GTCTTTGATG GCCTGGGCGC GATCCCGCGT
CTGGATCTGG AGGTTGCGGG TGATCCGCGC GCCTACGAGG CCGGTGACAC CGCAACACTG
CAATCCGCCA CGAACTATCC GGCCTATATC ACGCGCGGTG AATTGCGGAT CGTGGACCTT
GCGGCCATCG GCGGGCAGCG CACTCTTCAG GTCGTGCCGA TCCTGCCCAA CGGAACCGCA
CAGGTTGAGG TGCCAGAGGG ATCGCGCATC GCGGTCATCC ACCGCGTCTA CGATGCCCAG
GGGCGCTATG ATGAGACGTT CCCTGTTTTG CTGAGTGAGC CGGATCGCCG CCCCTTGGCC
AGTGATGTCG AAGACGGCTC GGACCTGACG GCGCGGTCGC GCATTCCGGT GCATGGCGGG
GCCGTGACGG TGCGCGGCAC CTCCATCGTG GAGGGGGCCG CAGTGACGGC CCTGGGCGAG
CGCGTTCAAA GCGACGGGTC GGGAGGGTTT GTCCTGCAAC GCATTCTGCC GCCCGGTGAA
TATGGTGTTG ATGTGCAGGT CGCGGGGCCC GGGCAGCACG TCGATCTTGT GCGCGACATC
GAAATCCCGC GGTCCGAATG GTTCACGACA GGGATGGTCG ATCTGACCGT TGGCTGGCGA
GAGATTGAAG GCGAGGAGAC GGAGCAATGG GATTCCGGTC GTGTCGCGTT CTACGTCGAT
GGGCGCACCG CGAACGGCTT TGAGATCACC GCACAGGCCG ATACGGGCGA GGGCGATATC
GAGGACATCT TCCGCCGTCT GGAGGAGCGT GATCCCCGCT CCACCGTGCA ACGCATTGAT
CCCGATGATC TTTACCCGAC CTATGGCGAC GACTCCACGC TTGTGGACGA TACGCCCACC
TCGGGCCGGC TTTACGTGCG GATCGAGCGG GATGGGAACC ACGTGCTTTG GGGCGACTTC
GACGCGGGAC TTGATGGCGC AAGGCTCGTA CGCAACGACC GGTCGCTTTA TGGCGCGCAG
GGTTATTGGG CCACGGCAGA CACAACGCTG CGCGGTGAGG CGCGCGCCAG CGTCCTTGCC
TATGCGGCCA GCCCCGACAT GCTGGCGCAG CGGGACGTGT TTCTGGGCAC TGGCGGCTCC
GTCTATGTGC TGCAACGGCA GGATATCGGC GTCGCGACCG AAGTTCTGAG CGTTGAGGTG
CGTGACCCCG TGTCTGGCCG TGTCATCGAC ATCGTGCGCC TGACACCGGG CGAGGATTAC
GAGATCAACT ACCTGCAGGG CATCGTGACC CTGTCCGCGC CTCTGGCCAG CCGCGTCAGT
TCGTCCGGGA TCGTCAGCAC ACCGGGCGAT GACCCGCAAC TCAGGCTGGT CGCGCAATAT
GAATACACGC CGACCGTCAC GGACGTAGAT GGTTATTCGG TCGGTGGCCG GGCCGAGGCG
TGGGTGACCG ACGATGTGCG CGTTGGCGTC TCGGGCCTGG TCGAAGAGAC CGGAACAGCC
GATCAGACGG TGATGGGGGC CGACATCGAA TGGCGCATCG GCGAGAACAG CCATGTGCGC
CTGGAATATG CGGAAAGCGA AGGGCCGGGC TTTGGGTCGA CCTTCTCCGC GGATGGTGGT
CTGATCTTTG ACACAGTGGG CCCCAACGGC GGTTCTGGCA CGGCCATTCG TGGTGACGCC
CGGCTTGATT TTGCGGATAT CGGCCTTGCG GGCGACGGGG TGATGGGCGC GTATTACGAG
GAGCGGGAGG AAGGCTTCTC CAGCCTCGAT TACAGCGTCA CCTCCGCCAC GGGTAATGAA
ACGCTTTGGG GGGTGTTCAT CGACGCCACT CCGCGCGAAG GGCTTCGATA TTCGCTAACC
TATGACGATT ATTCCAACAC CGCAGGGGAG TATGATCGCC GGGGAGAGGG CGCTGTCGAG
CTGGCGCTGA ACGCCGCCTA CACGCTCGGC CTGGGGTTGG AGCATACGGA CCGGGACCGC
GCCGCATCTT TCGGGGAAAC CGGGCAGCGC ACTGACGTTG GCGCGCGCCT GACCTATTCT
TATGGCGAGG ATCGCGACGT CTATATTTTC GGTCAGGCGA CCGTCGCGCA TGAGGGACTC
GAGCGGAATG ATCGCCTCGG TGTCGGCGCG AATTACGCCT TTGCCGACGG ATGGAGCGTG
CAGGGCGAGG TGTCCGGCGG GTCCCGTGGC CCCGGTGGAT TGCTCCAGTT GGGGTATGAT
GATGGGGAGG GGACGACCGC CTATATCGGC TATGAACTTG ATCCCGGCCG GACGATTTCT
GGCGTCACGC TGGATGGTCG CGACAATGGA CGCCTGATCG CCGGTGCCCG TCGGCAAGTG
AACGACCAAC TCACGTATTT CGGTGAGAAC ACATATGATA TGTTCGGGCG ATACAATTCG
CTTAGCACCG CCTACGGACT GACCTATCAG ACGACGGAAT TCCTCAGCTA CACCGCGGCC
CTTGAGTTTG GATCCGTCGA CGACAGCTTT GCCAATGACT TCGACCGCAG CGCCATCAGT
CTGGGCGTGC GCTATGAGGA TGAGGCGCTG ACCGCCGCCG CGCGCCTGGA ATACCGGATT
GAGGAGGGGG AGCGTTCGGG CGCGCCGCTT GACAGCGAAA CCGTCGCCCT CACGCTGGAT
GGCCGCTATA TCATCGACGA TCACAGCCGG TTCGTGTTCT CGTTTGAGGG GATCGACACG
GATACTGATG AAAGCTCGAT CCTGGATGGC AGTTTCGTTG ATGCCAGCGT CGGGTATGCA
TTTCGCCCCA CGGACAATGA TCGCCTCAAC ATGCTGGTGC GGTATCGCTA CCTCTTTGAT
GATGTCGGCC AGCGGCTGAA CGGCACCGAT GAACTTGGGC CGCGTCAGCG CACCCATGTC
TTCAGCGCCG ACTCCAGCTA TCTGCTGAAC GATCAGTTGC GCATCGGCGC GCGCGTCGGG
TTTCGCCTGA CCGAGGCGGC GGCGACGGAA ACGGATTCTT TCACCGACAA TGACGCCTAT
ATCGCGGTGC TGAATGCGCG CTATCACATG CTGCACAACT GGGACGCGCT GCTGGAATGG
CGTGCCCTGC GCGCAGAGCA GGCGGGCTTC ACCGAAACAA GCGTGTTGGG CGCCATCTCT
CGGCAGATCG GCAACGGCGT CAGCCTTGGT GTCGGCTACA ATTTTGGCAG CTTCTCGGAC
GATCTCACGG ATCTGACCCG GGACGATCAG GGGCTGTTCT TGAACCTGAC GGCCAGCTTC
TAG
|
|---|
| Protein sequence | MPAAAQSCAG DARLIDGVCL PAISAPGPRI ENVPTGFVIS LDGEVFEGDD EVRDLVRRTD
VRLANADIEV VFDGLGAIPR LDLEVAGDPR AYEAGDTATL QSATNYPAYI TRGELRIVDL
AAIGGQRTLQ VVPILPNGTA QVEVPEGSRI AVIHRVYDAQ GRYDETFPVL LSEPDRRPLA
SDVEDGSDLT ARSRIPVHGG AVTVRGTSIV EGAAVTALGE RVQSDGSGGF VLQRILPPGE
YGVDVQVAGP GQHVDLVRDI EIPRSEWFTT GMVDLTVGWR EIEGEETEQW DSGRVAFYVD
GRTANGFEIT AQADTGEGDI EDIFRRLEER DPRSTVQRID PDDLYPTYGD DSTLVDDTPT
SGRLYVRIER DGNHVLWGDF DAGLDGARLV RNDRSLYGAQ GYWATADTTL RGEARASVLA
YAASPDMLAQ RDVFLGTGGS VYVLQRQDIG VATEVLSVEV RDPVSGRVID IVRLTPGEDY
EINYLQGIVT LSAPLASRVS SSGIVSTPGD DPQLRLVAQY EYTPTVTDVD GYSVGGRAEA
WVTDDVRVGV SGLVEETGTA DQTVMGADIE WRIGENSHVR LEYAESEGPG FGSTFSADGG
LIFDTVGPNG GSGTAIRGDA RLDFADIGLA GDGVMGAYYE EREEGFSSLD YSVTSATGNE
TLWGVFIDAT PREGLRYSLT YDDYSNTAGE YDRRGEGAVE LALNAAYTLG LGLEHTDRDR
AASFGETGQR TDVGARLTYS YGEDRDVYIF GQATVAHEGL ERNDRLGVGA NYAFADGWSV
QGEVSGGSRG PGGLLQLGYD DGEGTTAYIG YELDPGRTIS GVTLDGRDNG RLIAGARRQV
NDQLTYFGEN TYDMFGRYNS LSTAYGLTYQ TTEFLSYTAA LEFGSVDDSF ANDFDRSAIS
LGVRYEDEAL TAAARLEYRI EEGERSGAPL DSETVALTLD GRYIIDDHSR FVFSFEGIDT
DTDESSILDG SFVDASVGYA FRPTDNDRLN MLVRYRYLFD DVGQRLNGTD ELGPRQRTHV
FSADSSYLLN DQLRIGARVG FRLTEAAATE TDSFTDNDAY IAVLNARYHM LHNWDALLEW
RALRAEQAGF TETSVLGAIS RQIGNGVSLG VGYNFGSFSD DLTDLTRDDQ GLFLNLTASF
|
|---|
| |