Gene Jann_3567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3567 
Symbol 
ID3936042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3632194 
End bp3633000 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content58% 
IMG OID637905942 
Producthypothetical protein 
Protein accessionYP_511509 
Protein GI89056058 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAG AGATGGCCGT CCGGGAGGCG ACACGCCTCA GTTCCAAACT GATCTATGAG 
GTTATCCGTC GCGACGGTGA AGAGGAATTA GAGCGCCCCA CACGGTCGCT CGTCTGGTCA
GGCATCGCCG CCGGTATCCT GATTTCCTTC TCCGTTCTGG GAGAGGCAAT CTTTCGAACA
TATTTGCCGG ACGCGCCCTG GCGGTTCCTT CTAGAAAACC TCGGTTACAG TCTTGGTTTC
CTACTGGTCA TTCTGGGCCG AATGCAATTG TTCACGGAAA ACACCATCAC CACAATCCTT
CCGTTGGTTG CAGAACGGTC CAGCCGCTGT CTGACGTCGG TCCTGCGGTT GTGGAGCATT
GTCTTGATCG CAAACATCGT GGGGGCCTTC GTCGCGGCGG CGTTTATGAC CCAAACCTCT
GGCATAGCGC CTGATCTACT GACCACGATC AACGAACTGT CGCGCCATGC GACTGGCTTT
TCGGCGACCG AAGGCTTCAT CCGCGCGATC CCTGCCGGTG TTCTGGTGGC CTCCATCGTT
TGGATGATGC CAAGTCAAAA CGGGGGCGAG GTGATGCTGA TCGTCATCTT CACCTGGCTC
ATCGCGGCGG GCGATTTCAC GCACATCATT GCAGGCTCGG TAGAGATGTG GGTGCTGATC
TTGCAGGGTG ATCTTGGTGC GTCCGTCGCG GCCTTCAGGT TCTTCGTGCC GGTTCTCGCC
GGAAATATCG TGGGTGGAAC GCTGGTGTTC GCGCTTCTGG CCTGGGGCCA GGTGAAGGAT
GAGGTGGAAT TACGCGACGA ACCCTAG
 
Protein sequence
MREEMAVREA TRLSSKLIYE VIRRDGEEEL ERPTRSLVWS GIAAGILISF SVLGEAIFRT 
YLPDAPWRFL LENLGYSLGF LLVILGRMQL FTENTITTIL PLVAERSSRC LTSVLRLWSI
VLIANIVGAF VAAAFMTQTS GIAPDLLTTI NELSRHATGF SATEGFIRAI PAGVLVASIV
WMMPSQNGGE VMLIVIFTWL IAAGDFTHII AGSVEMWVLI LQGDLGASVA AFRFFVPVLA
GNIVGGTLVF ALLAWGQVKD EVELRDEP