| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3548 |
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| Symbol | |
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| ID | 3936023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3611201 |
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| End bp | 3612037 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637905923 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_511490 |
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| Protein GI | 89056039 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAAA TGATTGGAGC GGACCACAGG CGTTGGGCTT CGCTGCGACC CACCTTCCCC
AACCCGGGCC GATACCGCGC GGCCAACGCA AACATGAGAC GGACGGACAT GAAGACGACG
GATCAGACCA TTCTTGTTAC CGGCGCAAGT TCCGGGATCG GCGCAGTTTT GAGCACCAGT
TTGGCTGCGG CGGGAAACCG CGTGATTGCC TGCGGTCGGC GCGAAGAACC ATTACACGAT
CTTTCGGCGA AAAATGATGG CATCGGCTAT CGGCTGTGCG ACCTGCAGGA CAATGATGCG
ATCAGAGAAC TTGCTGCGGA GCTTGGACCC CAGATCGATA TCCTGATCAA CTGCGCAGGC
ATTTCTCAAG AGCTGTCGCT GACGGATCAG GGGGGTCTGG ATGCCCAGTT GAAGGAAGTG
GACATCAATT TAAACGGCGT CATTCGGATG GTTCACGCGT TCCAACCGCA TCTCACGGAC
AGAGGGGAGA CTGCCATCGT GAACGTATCA TCTGCGCTCG CCTTTGTTCC GGATGCAGCG
CGTCCCATCT ACAGCGCGAC GAAGGCCGGT CTGCACGCCT ATACGCGCGC GCTCCGGCAT
CAACTTGCTG GAACCGATGT GCGCGTGTTT GAACTGATGC CTCCGCTTAC AGACACCCCC
ATGGCCGAAA ATGTTACCGA CGTGCCGAAA CTCTCGCCCG AGAAACTCGC GGAGATTTTC
ATCAGAGATT TGCAACGAAA CACGCTTGAA ATCGCACCTG GGCTTAGCTC CACAGTGAGA
TTGCTGTCCC GTCTCGCACC GGCCTTTTTG TTTCGAAAGC TCAACTATCA CAGATAA
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| Protein sequence | MAQMIGADHR RWASLRPTFP NPGRYRAANA NMRRTDMKTT DQTILVTGAS SGIGAVLSTS
LAAAGNRVIA CGRREEPLHD LSAKNDGIGY RLCDLQDNDA IRELAAELGP QIDILINCAG
ISQELSLTDQ GGLDAQLKEV DINLNGVIRM VHAFQPHLTD RGETAIVNVS SALAFVPDAA
RPIYSATKAG LHAYTRALRH QLAGTDVRVF ELMPPLTDTP MAENVTDVPK LSPEKLAEIF
IRDLQRNTLE IAPGLSSTVR LLSRLAPAFL FRKLNYHR
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