Gene Jann_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3544 
Symbol 
ID3936019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3608328 
End bp3609041 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content51% 
IMG OID637905919 
Productphosphoglycerate mutase 
Protein accessionYP_511486 
Protein GI89056035 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.977141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.359428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACCTGA AAAAGAATAA AAATGCACCT TATATATACG GGAAAAATCT AACTAATATT 
TTAGTAGAGA ATCTCACCAA AGAACACACG AATGAAACGG CGCTCAAGAT GAATAGAACA
GTTCGATATT TGTCCCACCC ACAGGTTCTG ATTGAACCCA ACAAGGATGT CCAAAGCTGG
TCCTTGAATG CAGTCGGTCG AAACCGTGTA GACATGCTCG CGAAGTCCGG TGCGCTGATG
GATACTGCAA TGGTGGTATC CAGTGCAGAG ACAAAGGCAC TTGAGACCGC CAGACCTCTC
GCAAAAGCTG CAAATTGCGA CGTTTGGGTT CGCGAACAAA TGCACGAGAA TGACCGCAGT
GCGACCGGGT TTCTTCCTCC AGAGGAGTTC GAATCCGTCG TGGATCAGTT CTTTGCCAGT
TCCAAAGACA GCATAAGGGG TTGGGAAGCT GCCGCCGCAG CTCAGGCACG GATCGTCGAA
GAGGTTCAAA CCTGTCTAAG TGTTCCTGCG GCCGGAGATG TTCTCTTTGT CGGTCACGGC
GGAGTCGGCA CATTGTTGTG GTGTCATTTG ACCGGAGTGC CCATCAGTCG AACGTTCGAT
CAAGCTGTTG GAGGCGGATG CTATTTCGCG TTTGACGCGT CGGACTGTCG ACCAAAGTTC
GGCTGGCGTC CGATGGAAGA GCTATCGGCC GAGGTGGATC TTCGACCGTC TTGA
 
Protein sequence
MDLKKNKNAP YIYGKNLTNI LVENLTKEHT NETALKMNRT VRYLSHPQVL IEPNKDVQSW 
SLNAVGRNRV DMLAKSGALM DTAMVVSSAE TKALETARPL AKAANCDVWV REQMHENDRS
ATGFLPPEEF ESVVDQFFAS SKDSIRGWEA AAAAQARIVE EVQTCLSVPA AGDVLFVGHG
GVGTLLWCHL TGVPISRTFD QAVGGGCYFA FDASDCRPKF GWRPMEELSA EVDLRPS