Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3543 |
Symbol | |
ID | 3936018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3606965 |
End bp | 3607729 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637905918 |
Product | prephenate dehydrogenase |
Protein accession | YP_511485 |
Protein GI | 89056034 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.372854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACTT CGATGTCAAA TACAGCCCAA AAGTCCGTGG GGATCGTTGG GTTTGGAGCT TTCGGAAAAC TGATTGCTCA GAGCCTGCAT GGGCATTTTG ATTTGAAGGC CCACGACCCG CGATCAGACC ATCACGATGT TGCAGCCAAC CTCGGTGTAC GTTTCACTTC TCTTGAAGCT GTCGCACGTT GCGACATGAT CGTGATCGCG GCACCGGTAT CGAGCTTCGA AGACGTTTTG GTCTCGATTG CCACCGTCTG TCGTCCCGGG ACGTTGGTAA TTGATGTCGG ATCTGTCAAA GTGCATCCCG CTGATCTGAT GGAGAAACAC CTGCCGGACT ACGTCAATAT TGTCGCGACC CATCCGTTAT TTGGGCCGCA AAGTGCCTGC GATGGCATCA AGGGGCTAAA AATTGCCGTT TGTCCAATTC GAGGGCTGAA GCATTGGCCA CTCGCGGTGT TTCTCCGCAA ACATCTTGGC CTTCAGGTCA TCATGACGAC ACCCCACGAT CACGACCGGG AAGCGGCAAC AGTTCAGGGT TTGACGCATC TGATTGCCAA GGTATTACAG AGAATGGGGC CTCTACCTTC CAGAATGACG ACCCGGAGCT TCGACCTGCT CGTTGAGGCC GTTTCGATGG TGCAAACCGA TGCTCCGGAA GTGTTTGATG CAATAGAGAA GGCGAATCCT TATTCGGCTG ACATCAGGCG GAGTTTTTTC GAATTGGCTC ACAAACTGAG CGTTGAGTTG GAAAGCAACG TGTAA
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Protein sequence | MNTSMSNTAQ KSVGIVGFGA FGKLIAQSLH GHFDLKAHDP RSDHHDVAAN LGVRFTSLEA VARCDMIVIA APVSSFEDVL VSIATVCRPG TLVIDVGSVK VHPADLMEKH LPDYVNIVAT HPLFGPQSAC DGIKGLKIAV CPIRGLKHWP LAVFLRKHLG LQVIMTTPHD HDREAATVQG LTHLIAKVLQ RMGPLPSRMT TRSFDLLVEA VSMVQTDAPE VFDAIEKANP YSADIRRSFF ELAHKLSVEL ESNV
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