| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3541 |
|---|
| Symbol | |
|---|
| ID | 3936016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3606025 |
|---|
| End bp | 3606384 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637905916 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_511483 |
|---|
| Protein GI | 89056032 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.520648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.50546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATACAT CTGGTCACAT AGCTGCTGTG CTCGGTCCAA CTCTGATTAT CGTTACGATA
TCGGAGTTCC TAAATCTCCG AATATGGACC GATGTTCATC CGACAGTCGT TTATCTGAAC
GGGCTGCTCT TCCTCATCGG TGGTTTGGTC ATAATCACGA CCCACAACGT TTGGCGACTA
GATTTTAGCC TCGTCGTCAC GTTGTCCGGA TGGCTTCTGG TTGTGGCGGG TACCTTTCGC
ATGCTGTTCC CTACTGCGCA GCAATTAGCT GCCGGATTGG GCACATACAT CGTGATTGCA
TCACTCTTTG TGCTCGGCGT TGTGCTTGCG GCTTACGCCT TCGTCAAATC ATCGCAATAG
|
|---|
| Protein sequence | MDTSGHIAAV LGPTLIIVTI SEFLNLRIWT DVHPTVVYLN GLLFLIGGLV IITTHNVWRL
DFSLVVTLSG WLLVVAGTFR MLFPTAQQLA AGLGTYIVIA SLFVLGVVLA AYAFVKSSQ
|
|---|
| |