Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3526 |
Symbol | |
ID | 3936001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3584318 |
End bp | 3585031 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637905901 |
Product | integrase protein |
Protein accession | YP_511468 |
Protein GI | 89056017 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0130406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCA AGAGTTACAA TCAGAAACGG GCCTGTTCCT TGGCCGGGAT CGATCCGCGT GTGTATCGGC GAAGGTCGAA CCGCCCCGCC GACACGGAAT TGCGGGCCCG GATGAAGGAG CTGGCATCCG AGCGGCGACG GTTCGGATAT CGCCGTCTGC ATATCCTACT GAAGCGAGAA GGCTGGGAGG TGAACTGGAA GAAGCTGTAT CGGCTCTACC GCGAAGAAGG GTTAACCGTC CATAAACGGG GCGGGCGCAA GCGTGCTGTG GGCACGAGGA CGCCCATGGC GATCCCGCAG GGGCCGAACC AGCGATGGTC GCTCGACTTC ATGTCTGACG CGCTGGAGGA TGGCCGCAGG TTCCGCGTGC TGAATGTCAT CGACGACTTC AGGCGGGAAT GTCTGGCCGC CGTGGTGGAC ACATCCATAG GTGGGGCACG CGTCGCCCGC GAACTGGATC GTATCGCTGA ACTGCGCGGC TACCCCTGCA TGGTGGTAAG CGACAACGGC ACCGAATTGA CCAGCAATGC GATGCTGAAA TGGCAGGAGG ACCGCAAGGT CGGTTGGCAC TACATCGCGC CTGGAAAGCC CATGCAGAAC GGCCTGGTCG AAAGCTTCAA TGGAAGGATG CGCGAGGAAT GCCTCAACGA ACACCTGTTC CCGTCTCTGC GCCATGCCGT CGTCCATCGT CCTCGGACCA ATGGCGGAAA ATGA
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Protein sequence | MKTKSYNQKR ACSLAGIDPR VYRRRSNRPA DTELRARMKE LASERRRFGY RRLHILLKRE GWEVNWKKLY RLYREEGLTV HKRGGRKRAV GTRTPMAIPQ GPNQRWSLDF MSDALEDGRR FRVLNVIDDF RRECLAAVVD TSIGGARVAR ELDRIAELRG YPCMVVSDNG TELTSNAMLK WQEDRKVGWH YIAPGKPMQN GLVESFNGRM REECLNEHLF PSLRHAVVHR PRTNGGK
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