Gene Jann_3511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3511 
Symbol 
ID3935985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3567096 
End bp3567914 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content65% 
IMG OID637905885 
ProductIclR family transcriptional regulator 
Protein accessionYP_511453 
Protein GI89056002 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000292695 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000232914 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCTCCG CGACAAAGAC CCTAGAGCTT TTGGCGCATT TCACGACGGC GCGGCCCGAG 
ATCGGGCTAT CCGCGATGTG CCGTTTGGCG GGGCGCGACA AGGCGACGAC CTACAGGCAT
CTGCAATCGC TGGAAGAGGT TGGTTTTGTG GAGCAAAACC CAACCAACAA GATGTACCGC
CTCGGCCCCG CGCTGCTGCA ACTGGCGCAA ACGCGCGAGG CGACGGTGCC CCGCAAAGCC
GCGGCAGAAG CCGCATTGGC CCGTCTCGCG AACGCCACCG GAGAGACCAG CCACGTCTCG
GTCCTGTCCG GCAGCACCGT TTACGCGCTC GCGTCGTGCG AATCGCACAG CCACTCCACC
CGGGTTATCA TCGACGTGGA TATCTTACCG CTCCATGCGA CCGGCTCCGG CCTCTGCGCG
CTGGCGTTTG GGCCGTCGGA GCTGATGGAT GTGGTGGGCG ATGCACCCGA GGTCTTCACC
CCTCGCACGC CCGCTACGGG CGCCCAGGTG GCGCGTGCCG TCGCGCAGAC CCGCGACACC
GGCTTCGCCC AATCCGACCG CCACTACGGC GAGGATACGC ATTCGATCTC GGCCCCGATC
TTTGATCAGA CAGGACACTA CGCGGGCGCT GTGACCGTGG CCAGCGTGGC GACCCGTTTC
ACGCCAGCGC TTGGAGACTG CATGAAACAC CACCTCGTCA TGGCGGCCAG AGATATCACC
CGAAATTGGG GCGGCACCCT GCCCCGCAGT GTGGAAGCCG CCTGGGCCCG CACGCTGACT
GACACACTGG ACCCCTCTTC TATGGACATC GCCTCATGA
 
Protein sequence
MSSATKTLEL LAHFTTARPE IGLSAMCRLA GRDKATTYRH LQSLEEVGFV EQNPTNKMYR 
LGPALLQLAQ TREATVPRKA AAEAALARLA NATGETSHVS VLSGSTVYAL ASCESHSHST
RVIIDVDILP LHATGSGLCA LAFGPSELMD VVGDAPEVFT PRTPATGAQV ARAVAQTRDT
GFAQSDRHYG EDTHSISAPI FDQTGHYAGA VTVASVATRF TPALGDCMKH HLVMAARDIT
RNWGGTLPRS VEAAWARTLT DTLDPSSMDI AS