| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3505 |
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| Symbol | |
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| ID | 3935979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3560763 |
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| End bp | 3561200 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905879 |
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| Product | MarR family transcriptional regulator |
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| Protein accession | YP_511447 |
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| Protein GI | 89055996 |
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| COG category | [K] Transcription |
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| COG ID | [COG1846] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000513952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTCCCGCA AATTTCCCCC GACCGCGCGC TCGTTGCCAA TGGCGCTGAT CCGCGCACGC
GAAGGCGTTA TGGCACCGAT CCGCGACATG CTGTCAGAAA CCGGAATTAC CGAACAGCAA
TGGCGCGTTC TGCGGGTGTT GTCCGAGAAC GGGCCGTTGG ATGCCACATC CCTTGCCGAC
CGCGCGAGCC TTCTGTTCCC CAGTCTGACC CGCATCGCCA CGAAGATGCG TGACAAAGGG
TTGATCACCC AGACCCGCGA CGAGGTGGAC CGCCGCCGGC ATTTCATTGC GATCACGGAA
GACGGGCAAA AGATCATCGA CGACCGCGCG GATCAATCGG CGCAGATCGT GGCGGATATT
CGGGCGACAC TCGGCGAGGA CGATTACGAA ACACTGCTGG ACTTGCTGGC AAAACTTGAC
CCCGGGTCAC GGGACTAA
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| Protein sequence | MSRKFPPTAR SLPMALIRAR EGVMAPIRDM LSETGITEQQ WRVLRVLSEN GPLDATSLAD
RASLLFPSLT RIATKMRDKG LITQTRDEVD RRRHFIAITE DGQKIIDDRA DQSAQIVADI
RATLGEDDYE TLLDLLAKLD PGSRD
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