| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3503 |
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| Symbol | |
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| ID | 3935977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3558723 |
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| End bp | 3560270 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905877 |
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| Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_511445 |
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| Protein GI | 89055994 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00116503 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAAGC TGGACGAAAA CATCGCAAAA CTGGACGGCT ATGTGGCGCG GTTCCGCGAG
GGTGGCATTC CAAACCGGAT CGGGGGCGTG GACGTGCCGG GGGCTGGCGG TGTGTTCCAG
ACCATGTCTC CGGTCGATAA AAGCGTCATC TGTGATGTGG CCCACGGAAC GGAGGCGGAT
ATCGACGCCG CCGCCAATGC GGCCCACGGG GCGTTTCCCG CTTGGCGTGA CATGCCCGCG
ACGGAGCGGA AGCGCATCCT TGTTCGCGTG GCCGACGCCA TTGAAGCGCG CGCCGAGGAA
ATCGCGCTCT GCGAATGCTG GGACACGGGC CAGGCTTTCA AATTCATGTC CAAGGCGGCC
CTGCGCGGGG CGGAAAACTT CCGTTATTTT GCTGATCAGG TGGTTCAGGC CCGCGATGGT
CAGCACCTGA AATCGCCCAC GTTGATGAAC GTGACCTCCC GCGTGCCCAT CGGCCCCGTG
GGGGTCATCA CGCCCTGGAA CACGCCATTC ATGCTGTCGA CGTGGAAGAT CGCACCGGCG
CTGGCGGCGG GCTGCACGGT GGTCCACAAA CCGGCGGAAG CTTCCCCGCT GACCGCGCGG
CTGTTGGTGG AAATCGCGGA AGAGGCGGGC CTTCCGCCCG GCGTGCTGAA CACGGTCAAC
GGCTTCGGGG AAGGGGCTGG AAAGGCGCTC TGCGAGCATC CGAAAATCCG GGCGATTGCC
TTTGTGGGTG AATCCAAGAC AGGCTCCCTG ATCACTAAGC AAGGGGCGGA CACGCTCAAG
CGCAACCATC TGGAATTGGG CGGCAAGAAC CCCGTCATCG TTTTTGAAGA CGCCGACCTG
GAGCGCGCTT TGGATGCGGT GATCTTCATG ATCTACTCCA TCAATGGGGA GCGTTGCACG
TCGTCCTCCC GGCTTCTTGT GCAAGATACG ATCCGAGAAG ATTTTGAGGC GAAGCTGGTG
GCGCGCGTCA ACGCCATCAA AGTCGGCCAC CCCCTGGATC CGACGACGGA AGTGGGCCCG
CTGATCAGCG AAGAGCATTT CGCCAAAGTT ACCAGCTACT TCGATATCGC GCGCCAGGAC
GGTGCGACCA TTGCGGCAGG GGGCGAGGCC TTCGGTGACA GCGGCTACTT CGTCAAACCC
ACGCTCTTCA CCAAGGCCAC CAACGACATG CGCATTGCGC AGGAAGAGAT CTTTGGTCCC
GTCCTCACCT CCATCCCGTT TTCGTCCGAG GAGGAGGCGC TTCGGATCGC CAACGACACA
CCCTACGGCC TCACCGGATA TGTCTGGACC AATGACCTGA CCCGCGCCCT GCGGTTCACG
GATGCGCTGG AGGCGGGGAT GATTTGGGTG AATTCCGAGA ATGTCCGCCA CCTGCCGACC
CCGTTCGGTG GGGTGAAATC GTCGGGGATC GGACGCGATG GCGGGGATTG GAGTTTCGAG
TTCTACATGG AGCAAAAGCA TGTGGGCTTC GCCGTAGGGC AGCACAAAAT CACCAAGTTG
GGTGCGCTCA AGCAGCAAAG CGATAGCCCA GAAAGGGGAG CCTCTTAG
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| Protein sequence | MSKLDENIAK LDGYVARFRE GGIPNRIGGV DVPGAGGVFQ TMSPVDKSVI CDVAHGTEAD
IDAAANAAHG AFPAWRDMPA TERKRILVRV ADAIEARAEE IALCECWDTG QAFKFMSKAA
LRGAENFRYF ADQVVQARDG QHLKSPTLMN VTSRVPIGPV GVITPWNTPF MLSTWKIAPA
LAAGCTVVHK PAEASPLTAR LLVEIAEEAG LPPGVLNTVN GFGEGAGKAL CEHPKIRAIA
FVGESKTGSL ITKQGADTLK RNHLELGGKN PVIVFEDADL ERALDAVIFM IYSINGERCT
SSSRLLVQDT IREDFEAKLV ARVNAIKVGH PLDPTTEVGP LISEEHFAKV TSYFDIARQD
GATIAAGGEA FGDSGYFVKP TLFTKATNDM RIAQEEIFGP VLTSIPFSSE EEALRIANDT
PYGLTGYVWT NDLTRALRFT DALEAGMIWV NSENVRHLPT PFGGVKSSGI GRDGGDWSFE
FYMEQKHVGF AVGQHKITKL GALKQQSDSP ERGAS
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