| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3502 |
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| Symbol | |
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| ID | 3935976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3557739 |
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| End bp | 3558722 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637905876 |
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| Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD |
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| Protein accession | YP_511444 |
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| Protein GI | 89055993 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2514] Predicted ring-cleavage extradiol dioxygenase |
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| TIGRFAM ID | [TIGR02295] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00320908 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGTTC CGGCCCCCAA TCTATACCCC GATTTCAACG TCATCCGCTT GAGCCACGTG
TGCCTGAATG TCGCCGATCT GGCCGCGTCA AAGACGTTCT ACACCGATAT CCTCGGCCTC
CAGATCACCG ATGAGACCGA CACCCACATC TACCTGCGCG CCATGGAAGA GCGGGGGCAT
CATTGCGTCA TCCTGCAAAA GTCCGACGCC CCCGGCACGG TGGAGGTCAT GGGCTTCAAG
ACTTTTGACG AAGATGATCT GGACCGCGCA GAGGTGTTCT TCAGTGCCCG GGGCCGTCCC
ACCGCATGGG TCGACCGCCC CTATCAAGGC CGCACGCTGC TGACGTCCGA CAACATGGGG
ATCCCGCTGG AATTCTATCG TCAGATGGAT CGCCTGCCTC CGATCCATCA GCAATATGCG
CTCTATCGTG GTGTGAAACC CTTGCGCATC GACCATTTCA ACTGCTTTTC CCATGACGTC
GACGCCTCGG TTGCGTTCTA CAATCAGTTC GGGTTTCGGG TGACCGAATA TACGGAAGAC
GAGGATTCTG GCCGTCTTTG GGCGGCGTGG ATGCACCGCA AGGGGGGCGT CCACGACATG
GCGTTCACCA ATGGAACCGG GCCGCGCATG CATCACGTGG CGTTCTGGGT ACCAACGCCG
TTGAACATCA TCGACCTGCT CGATCTGATG GCGACCACCG GCTATGTCAC GAACATCGAA
CGTGGTCCCG GGCGGCACGG GATTTCCAAC GCGTTCTTCC TCTATATCCT CGATCCCGAT
GGCCACCGGA TCGAGATCTA TTGCTCGGAT TATCAGACGG TGGACCCGGA TCTGGAGCCG
ATCAAATGGG ATCTGAAAGA CCCTCAGCGG CAAACGCTTT GGGGTGCGCC CGCGCCGGAA
AGCTGGTTCA AGCATGGCTC GGCATTTGTG GGCGTGGACA CGCGCGACAG TGACATGAAG
GCAAGCCCCA TCGTGGCCCC CTGA
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| Protein sequence | MPVPAPNLYP DFNVIRLSHV CLNVADLAAS KTFYTDILGL QITDETDTHI YLRAMEERGH
HCVILQKSDA PGTVEVMGFK TFDEDDLDRA EVFFSARGRP TAWVDRPYQG RTLLTSDNMG
IPLEFYRQMD RLPPIHQQYA LYRGVKPLRI DHFNCFSHDV DASVAFYNQF GFRVTEYTED
EDSGRLWAAW MHRKGGVHDM AFTNGTGPRM HHVAFWVPTP LNIIDLLDLM ATTGYVTNIE
RGPGRHGISN AFFLYILDPD GHRIEIYCSD YQTVDPDLEP IKWDLKDPQR QTLWGAPAPE
SWFKHGSAFV GVDTRDSDMK ASPIVAP
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