| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3497 |
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| Symbol | |
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| ID | 3935971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3553226 |
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| End bp | 3554053 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905871 |
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| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
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| Protein accession | YP_511439 |
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| Protein GI | 89055988 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0172625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA AAATCGTCCT GACCGGAGCC GCTGGCCGCT GTGGCTCCAT CGTCCGCCCC
ATGTTGGCTG CCATATGTGA AGAGCTGATC AGTTCAGACA TTGTCGAAAG TATCGACGCA
CTGGCCGCCA ATGAGAGCTA CGTGAAGGCC GATCTGGCCG ACTACACTGC CATCGCCGCG
ATGATGGACG ACGTGGAGAT GGTCGTGCAT TTCGGCGCTA TCGTCGATGA GGGGCCGTTT
GAAGAGCTTC TGGGCCCGAA CTTCATCGGC TCCTACAACG TCTGGGACAG CGCCCAGAAG
GCCGGCGCGC GGCGCATCGT CTATGCGTCA TCGATCCATG CAGTCGGCAT GCACCCGCGC
CAGTCTTGCA TCGGGATTGA TGCGGAACAC CGGCCCGACA CCTTCTATGG CCTTGCCAAA
TGTTTCACGG AGGATCTAGG CCGCATGTAT TGGGAGAAGC GCGGGATCGA GAGTGTTCAC
CTGCGCATCC TGTCCTGCGC CCCGGTGAAG AATGCGCGCG CGTTGGGAAC GTGGTTGAGC
GACGATGACC TGGTACGCCT GGTGCAGCGT GCCATCGACA CGCCGACGAC CGGGTTCGCG
GTTATCTACG GCGTCTCGGA CAATGATCGC AGCCCCGTCG ACAATTCCAA GGCGGCGTTC
CTGGGCTACA GGCCGCAGGA CAATGCCGAG CAATTCGCGG AAGAGATTCT GGCGACAGAG
GGGGCGGGTG ATCCCGGCGA TCTGGCGCAA ATGGTCCACG GCGGCCCCTT TGGCCCGGTC
CCGCTTGGAC AGGGCGGCGC AGCGGCGGCC GCCAAAGGTG ACGACTGA
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| Protein sequence | MLKKIVLTGA AGRCGSIVRP MLAAICEELI SSDIVESIDA LAANESYVKA DLADYTAIAA
MMDDVEMVVH FGAIVDEGPF EELLGPNFIG SYNVWDSAQK AGARRIVYAS SIHAVGMHPR
QSCIGIDAEH RPDTFYGLAK CFTEDLGRMY WEKRGIESVH LRILSCAPVK NARALGTWLS
DDDLVRLVQR AIDTPTTGFA VIYGVSDNDR SPVDNSKAAF LGYRPQDNAE QFAEEILATE
GAGDPGDLAQ MVHGGPFGPV PLGQGGAAAA AKGDD
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