| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3486 |
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| Symbol | |
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| ID | 3935960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3538531 |
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| End bp | 3539793 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905860 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_511428 |
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| Protein GI | 89055977 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.290572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCT GCCATAAAGT GCCAACCCGC GGAGTTCAGA TCGCCCCCCC GCGGAACGGC
GATGGGCCTC TGTCACCCAT GACCACCCCG CTCCAAGGCA CCCGTGTCCT CGACCTCACC
AACGTCCTCG CAGGGCCGTT CGCCTGCCAC CAACTGGCGC ATCTGGGGGC TGAGGTCATC
AAGATCGAAA ACCCGCGCGG CGGCGATCTG GCGCGCAGTC TCGGGGCCTC GCCCGCGCTG
TCCGCCAAAG GCATGGGGAT CAGCTTCCTT GCGCAGAATG CGGGCAAACG CAGCATAACC
CTGAACCTGA AGGCAGAGGC CGGGCAAGTG GCCTTCAGGC GCCTGGTCGC CACCGCCGAC
GTGCTGGTCG AAAACTTCCG CCCCAGCGTG ATGGACCGTC TGGGCCTTGG CTACGACGCA
CTCAAAGCCA CAAACCCCGC CCTCATCTAC TGCGCCATTT CCGGCTTCGG GCAGGACGGC
CCTTGGGCCG CGAACCCGGC CTATGATCAG ATCATCCAGG GCGCGTCTGG CGTTATGTCG
ATCACCGGCA CTGGCGCGCC GACCCGCGTC GGCTACCCGC TTTCGGATAC CGTTGGCGGC
CTGACGGCTG CCATGGCGAT TACCGCCGCG CTGAACGCAT CCCCTCGGGG AACCTTCATA
GATGTCAGCA TGTTGGAGGC GACACTGGCC ACAATGGGGT GGATTGTCTC CAACCATCTG
ATCGGCGGCG TGACCCCCCA GGCCCACGGG AATGAGAACC CCACCTCCGC CCCGTCTGGC
ACCTTTCAGG CGCAGGATGT GCCCCTCAAC ATCGCCGCAA ACAAGGATGC GCAATGGCAG
GCGCTCGCGC CCCTCCTCGG TCGTCCCGAC CTCCTCGCAG ACGCCCGCTT CACGACGCGA
GAGGATCGCA AGACCAACCG CCACGCGCTG CGTGCGGAAC TCGAAACAAT GCTCACCGCC
AAACCCGCGG CCCATTGGGT CGAAACCCTC AATGCCCACG GCATCCCCGC CGGCCCGGTC
CTGACCGTCC CGCAGATCCT GGCCCATCCC CAGGTCGCCG ACCGCAACCT GATCTCGCGC
TTTGACACGC CCGGCGTCGA CATCCCCGTT GACGTTATCT CCACCGGCTT CCAGCTGGAC
GGCACCCGCC CCAGCGTACC AAAGCCACCG CCCACGCTTG GCCAGCACAC CCACGATATC
CTGACCGAAC TGGGCTACTG CGAGGAGGAC ATCCGCAGGA TGACCGAGGA GGGGGCGACA
TAA
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| Protein sequence | MRRCHKVPTR GVQIAPPRNG DGPLSPMTTP LQGTRVLDLT NVLAGPFACH QLAHLGAEVI
KIENPRGGDL ARSLGASPAL SAKGMGISFL AQNAGKRSIT LNLKAEAGQV AFRRLVATAD
VLVENFRPSV MDRLGLGYDA LKATNPALIY CAISGFGQDG PWAANPAYDQ IIQGASGVMS
ITGTGAPTRV GYPLSDTVGG LTAAMAITAA LNASPRGTFI DVSMLEATLA TMGWIVSNHL
IGGVTPQAHG NENPTSAPSG TFQAQDVPLN IAANKDAQWQ ALAPLLGRPD LLADARFTTR
EDRKTNRHAL RAELETMLTA KPAAHWVETL NAHGIPAGPV LTVPQILAHP QVADRNLISR
FDTPGVDIPV DVISTGFQLD GTRPSVPKPP PTLGQHTHDI LTELGYCEED IRRMTEEGAT
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