| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3485 |
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| Symbol | |
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| ID | 3935959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3537544 |
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| End bp | 3538425 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905859 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_511427 |
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| Protein GI | 89055976 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.575249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAC TCGCATTCCT CGGCCTCGGC GTGATGGGCT ACCCGATGGC CGCTTATCTG
GTGAACGCAG GCCATTCCGT CACGGTCTAC AACCGCACCA CGGAGAAGGC CGAGACGTGG
GCCGCGGATA TCGGTGGCAA CCATGCGCCC ACCCCGCGCG AGGCATCCGA GGGCGCGGAT
TTCGTCATGG CCTGTGTTGG CAACGATGAC GACCTGCGCA GCGTCGTTCT GGGGGACGAC
GGCGCGTTGG CGGGCATGAA AGAGGGGGCG ATTTTCGTCG ATCACACCAC CGTCTCTGCC
CTCGTCACCC GCGAATTGGC CGAGATCGCC GCGAAACAGA ACGTCGGCTG GGTCGATGCG
CCCGTCTCCG GAGGTCAGGC GGGGGCCGAA AACGGCCAGC TCGCCATCAT GTGCGGCGGC
AAGGACGATC ACTTCTCCGC CGCCAAACCG ATCATCGCCG CCTATTCCAA GGGCACCGTC
CATTTCGGCG ATGTGGGCGC CGGGCAATTG ACCAAGATGG TCAATCAGGT CTGCATTGCG
GGCGCGATCC AGGCGGTGTC CGAAGGGCTT TACATGGCGA TGCAGGCGGG CCTCGACGCC
AAGAAAGTCG CCGATCTGGT CAGCCAGGGC GCGGGCGGCA GCTGGCAGTT GGCCAACCGG
GCGGGCACCA TGGTGGACAA CGACTTCAAC CACGGATTTG CCGTCGACTG GATGCGCAAG
GACCTCGGGA TCGCCCTGGC GCAGGGTAAG GATATGGGCC TCTCGCTGCC GGTCACGGCG
CTCGTTGACC AGTTCTACGG TGAGGTCCAG CAAATGGGCG GCGGTCGCTG GGACACCTCG
TCGCTGATCC AGCGGTTTCG GAAGATGAAC GGTGACATCT AA
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| Protein sequence | MAKLAFLGLG VMGYPMAAYL VNAGHSVTVY NRTTEKAETW AADIGGNHAP TPREASEGAD
FVMACVGNDD DLRSVVLGDD GALAGMKEGA IFVDHTTVSA LVTRELAEIA AKQNVGWVDA
PVSGGQAGAE NGQLAIMCGG KDDHFSAAKP IIAAYSKGTV HFGDVGAGQL TKMVNQVCIA
GAIQAVSEGL YMAMQAGLDA KKVADLVSQG AGGSWQLANR AGTMVDNDFN HGFAVDWMRK
DLGIALAQGK DMGLSLPVTA LVDQFYGEVQ QMGGGRWDTS SLIQRFRKMN GDI
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