Gene Jann_3484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3484 
Symbol 
ID3935958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3537053 
End bp3537382 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content60% 
IMG OID637905858 
ProductMarR family transcriptional regulator 
Protein accessionYP_511426 
Protein GI89055975 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.816245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.77191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACAC CCTCCTGCCC CGTTCATGCC AGCATCCTGG CCATTGGCGG AAAGTGGAAG 
CCTTGCATCC TCTACCGCCT GCAAAACGGG ACGTTCCGCT TCAGCGAGTT AAGACGGCAA
ATGCCCTGGA TCTCGGAAAA GGTCCTGATC CGTCAGCTCA AGGAACTGGA GAAGGACGGA
ATCGTGGTCC GGACGGATTA TGGCGAGGTG CCACCGCGTG TGGATTATGC GTTGAGCGAT
TACGGCGCGA CTGTCGGACC TCTCATGGAG ACGATGGCGG CATGGGGTGA ACAGCACCTG
AAACAGCCGC GCCGGAGGGA CGCGGAGTGA
 
Protein sequence
MPTPSCPVHA SILAIGGKWK PCILYRLQNG TFRFSELRRQ MPWISEKVLI RQLKELEKDG 
IVVRTDYGEV PPRVDYALSD YGATVGPLME TMAAWGEQHL KQPRRRDAE