| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3483 |
|---|
| Symbol | |
|---|
| ID | 3935957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3536216 |
|---|
| End bp | 3536848 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637905857 |
|---|
| Product | NADP oxidoreductase, coenzyme F420-dependent |
|---|
| Protein accession | YP_511425 |
|---|
| Protein GI | 89055974 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.584702 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACC ATCTCATCTT GGGTGGCGGG CGGTTGGGGG GAACGCTTGC TGCGCGCCTG
GCGGAAACTG GGCATGATGT CACCGTCCGG GTCCGCACGC CCGACGCAGA CGAATACGAT
GCGTTGCGCG GTGTGGCGAC GGTCATCGGC GTGGATGCGG CGGGGCCAGA CGCTGAGCTG
ACTTTTGTTG CGACGCCGTG GGATGCCACC GAACAGGCCA TCAGGGCGCT TGGCGATATG
GCGGGCCGCA CCGTGATCGA TTGCACCAAC CCGGTGAGCT ACGGACCAAC GGGCATGGCT
TTGTCCATTG ATGCCAACAC CTCCGCGGCA GAGATGATCC AGGCGTGGTT GCCGGACGCG
CATTTGGTCA AGGCGTTCAA TCAGGTCGGA TCGGGTATCT TGGGCGCGCC GTCGGCATTG
TCGCCTGCGC CCCTGATGGG GGTGGCCGGT GATGTCGCGA CGGCCAAGGA GACGGTCATC
GCACTTGTTC GCGACCTCGG GTTTGATCCC TTTGATGCGG GCGTGTTGTC CAATGCCCGG
CTGTTGGAGG CGCAGGCGCT CCTGTGGATG AGCCAGGCCT TCAGCGGCGG CGATCCCAGT
GGCTTTGCCT TTGCGCGCGC ACAGAAATCA TAG
|
|---|
| Protein sequence | MTDHLILGGG RLGGTLAARL AETGHDVTVR VRTPDADEYD ALRGVATVIG VDAAGPDAEL
TFVATPWDAT EQAIRALGDM AGRTVIDCTN PVSYGPTGMA LSIDANTSAA EMIQAWLPDA
HLVKAFNQVG SGILGAPSAL SPAPLMGVAG DVATAKETVI ALVRDLGFDP FDAGVLSNAR
LLEAQALLWM SQAFSGGDPS GFAFARAQKS
|
|---|
| |