| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3478 |
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| Symbol | |
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| ID | 3935952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3531375 |
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| End bp | 3532421 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637905852 |
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| Product | tRNA 2-selenouridine synthase |
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| Protein accession | YP_511420 |
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| Protein GI | 89055969 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2603] Predicted ATPase |
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| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.527623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTACA CCCTCACAGA CCTCCCCGCG CTGTTGGCGC ACGCCTTCGA CACCATCATT
GACGTCCGCT CGCCCGCCGA GTTTGCCGAG GATCACGTCC CCGGCGCCGT CAACATGCCC
GTCCTGTCGA ACGCGGAACG CGCCGAGGTC GGCACGATCT ACACCCAGGA AAGCCCCTTC
AAGGCCCGCA AGATCGGGGC CACCCGTGTG GCGCGCAATG CGGCGACGGC GATTGAAACG
CATCTGCTGG ACCGCGAAGG GGGCTGGCAG CCGCTGGTCT ATTGCTGGCG GGGTGGGCAA
CGCTCGGGCA GCTTCACCTC GATCCTACAA CAGATCGGCT GGCGCGCGCA GGTGCTGGAG
GGGGGCTATC AAAGCTGGCG CAGGCATGTC GTGGCGCAGC TTTATGAGGG CACGCTGCCG
GTCAAACTCA TCCGCTTGGA CGGCTATACC GGCACCGCCA AGACCGAGCT GATCAAGCGT
GTCGCACCCC TCGGGGCGCA GACGCTGGAC CTTGAAGGCC TGGCGTGCCA TCGCGGCTCG
GTTCTGGGCG ATATCGACGG CGATCAACCG GCGCAAAAGG GGTTCGAGAC GGCGCTGCTG
TCGGAACTCT CCGCCCTCGA CCCCGCGAAA CCCGTTTTGA TTGAGGCTGA ATCCGCCCGC
ATCGGCACCC TCCGCCTGCC GCCCGCCCTT TGGGTCGCGA TGAAGGACAG CCCCCGCATC
GTGGTGGAGG CCGCGCCGCA CCATCGCGCG CGCTTCCTGG CCGAGGCCTA CGTGGATCTG
TTCCACGACA CGCAGGCCCT CACGGACCGC CTCAACCACC TGCGCCCCCA TGCGGGCCAC
GCCACGGTGG ACCACTGGCT CAGCCTCCTG CAAACCAACC AACCCCAGGC CCTGGCCCAG
GCGCTCGTTA CCGACCATTA CGACCCGGCC TATGCCCGCC TCACCAAATC CAAATCCGCC
GCCCCTATCG CGACCATCGA CGCGGGTGAT CTCTCCGATG CGGCCCTCGA CACCGCCGCG
CGCACCATCA CGTCCCATTT GCGCTAG
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| Protein sequence | MAYTLTDLPA LLAHAFDTII DVRSPAEFAE DHVPGAVNMP VLSNAERAEV GTIYTQESPF
KARKIGATRV ARNAATAIET HLLDREGGWQ PLVYCWRGGQ RSGSFTSILQ QIGWRAQVLE
GGYQSWRRHV VAQLYEGTLP VKLIRLDGYT GTAKTELIKR VAPLGAQTLD LEGLACHRGS
VLGDIDGDQP AQKGFETALL SELSALDPAK PVLIEAESAR IGTLRLPPAL WVAMKDSPRI
VVEAAPHHRA RFLAEAYVDL FHDTQALTDR LNHLRPHAGH ATVDHWLSLL QTNQPQALAQ
ALVTDHYDPA YARLTKSKSA APIATIDAGD LSDAALDTAA RTITSHLR
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