| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3477 |
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| Symbol | valS |
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| ID | 3935951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3528059 |
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| End bp | 3531148 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905851 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_511419 |
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| Protein GI | 89055968 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0964875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGA CCTTCAACGC GGCCGAAGCC GAAGCCCGCA TCTACGCCAA ATGGGACCGG
TCCGGTGCCT TCAAGGCCGG TGCCAATGCC AAGCTGGGCG CGGAGCCCTT TTCCATCATG
ATCCCGCCCC CCAATGTGAC CGGCGTCCTG CACGTCGGCC ACGCCTTCAA CAACACGCTG
CAAGACGTCC TGACCCGCTG GCACCGGATG CGTGGCTTCG ACACGCTCTG GCAACCCGGC
ACGGATCATG CGGGCATCGC CACGCAGATG GTGGTGGAGC GTGAACTGGC GAAGTCCCAG
ATCCAGCGCA AGAACCTGAC GCGCGAGGAA TTCCTGGCCC ATGTGTGGGA GTGGAAGGCC
AAATCCGGCG GCACCATCCG CGAGCAACTC AAGCGCCTGG GCGCGTCGTG TGATTGGTCG
CGCGAAGCCT TCACCATGTC CGGCGCCCCC GGCGCGCCTG AGGGGGAGGA GGGCAATTTC
CACGACGCCG TCATCAAGGT CTTCGTGGAG ATGTACAACA AAGGCTACAT CTATCGCGGC
AAACGGCTGG TGAACTGGGA TCCGCATTTT GAGACGGCGA TTTCCGATCT GGAGGTCGAG
AATATCGACC AGCCGGGCCA CATGTGGCAC TTCAAATACC CCCTCGCAGG TGGCGCAACC
TACGAATACG TCGAGACGGA CGAGGACGGG GTCGAGACCC TGCGCGAGAC CCGCGACTAC
ATCTCCATCG CCACCACGCG GCCGGAAACC ATGCTCGGCG ACGGCGCGGT CGCGGTCCAC
CCCGATGATA CACGCTATGC AGCCATCGTC GGCCAGCTCT GCGAAATTCC TGTCGGTCCC
AAGGAACACC GCCGCCTGAT CCCGATCATC ACCGATGACT ACCCCGATCC CTCATTCGGC
TCGGGCGCGG TGAAGATCAC CGGCGCCCAT GACTTCAACG ATTACGAGGT CGCCAAGCGC
GGCAACATTC CCTGCTATCG CCTGCTCGAC ACCAAAGGCG CCTTGCGCGA TGACGGCGCG
CCCTATGCCG AGGCTGCCGC CATTGCCCAA GCCGTCGCCA ACGGAGACGC CACTCTGGGC
GACATGGACG TCGACGCCCT CAACCTCGTC CCCGACCACC TGCGCGGCCT CGACCGGTTC
ATGGCGCGGG AGCGCATTGT CGAAGAGATC ACCGCCGACG GCCTCGCGGT CATGACCACA
TCCGACGACC CGCGCTTGGG GGCGAAGCCC AAGAAGAAAA GCGGCGAGGA CGCGCAAGCG
GAGGAGCCGC CCGAGACCGA AAAACCACTG GTGCCGTTGG TGGAGGCGAA GCCGATCACC
CAGCCCTTCG GTGACCGCTC CAAGGTCGTG ATCGAGCCGA TGCTGACCGA TCAATGGTTC
GTCGACACCG CCAAAATCGT CGAACCCGCC CTCAATGCTG TCCGCTCCGG CCGCACGAAA
ATCATCCCCG AACAGCACCG CAAGGTGTAC TTCCACTGGC TGGAGAATAT CGAGCCGTGG
ACAATCTCCC GCCAACTCTG GTGGGGTCAT CAGATCCCGG TCTGGTATGC CGATGAAATG
GAGAACGGCG AAGTAGTGAA TGCCGGACCG ATGTTCTGTG CCGCGACAGA GCAAGAAGCA
CTTCAAGCAG CTCAAAGCCA CTATGGTCCG AAGCGAGTGG TCTTGCCCGA GAGCGTTGTC
CAGCAATCGG GCGGTCGGCT TAAAATGGAC GAGATGAAGA CTGCCAAGGG CAACGTCGAG
ATTAGCCTTA ACCTTGAGAA GTCCAACTAC GTGAAACTGC GTCGTGACCC GGACGTCCTC
GACACGTGGT TCTCCTCCGG CCTCTGGCCC ATCGGCACCC TCGGCTGGCC CGAGCAAACC
CCGGAACTCG ACCGTTACTT CCCGACCTCC ACGCTCATCT CCGGCTTTGA CATCATCTTC
TTCTGGGTCG CCCGGATGAT GATGATGCAG CTGGCCGTTG TGGACGACGT CCCCTTCCGT
GACGTCTACG TCCACGCCCT CGTCCGCGAC GAGAAGGGGC GCAAGATGTC GAAATCCATC
GGCAACGTCC TCGATCCCTT GGAACTCATC GACGAATATG GCGCCGATGC CCTGCGCTTC
ACGCTCACCG CCATGGCCGC CATGGGCCGC GACCTGAAAC TCTCCACCGA CCGCATCCAG
GGCTACCGCA ACTTCGGCAC CAAACTCTGG AACGCCGCCC GGTTCGCGGA GATGAACGAA
TGCGTGCCCG ACCCGGCCTT CGACCCCAAA TCCCCCACCC AGACCGTCAA CAAGTGGATC
ATCACGGAAA CCGCCCGTGC CCGCATCGCC CATGATGAGG CCCTTGAAAA CTACCGTTTC
AATGACGCGG CGGGGGGGCT CTACCAATTC GTCTGGGGCA AGGTCTGCGA CTGGTATCTG
GAATTTGCCA AGCCGCTTTT CGCCTCCGGT GACGACGCCG TCATTGCGGA AACCCGCGCC
ACGATGGCCT GGGTGATCGA CCAATGCCTG ATCCTGCTGC ACCCGACCAT GCCCTTCATC
ACCGAGGAAT TGTGGAGCGA AATCGCCACC CGTGACACCC TGCTGGTCCA TGCCGACTGG
CCGACCTACG GCGCGGAATT CACGGACATC GCCGCAGAAA AAGAGATGTC CTGGGTCATC
GCCCTGATCG AATCCATCCG CTCGGCCCGC CAACAGATGC ACGTCCCCGC AGGCCTGAAA
GTCCAGCTTC TGCAATCGGA TCTGGACGCG GCGGGTCAGG CGGCTTTCGA CACCAACCAA
GCCATGATCA CCCGCCTCGC GCGCCTCTCG GAGGTCACGC CAACCGACGC CTTCCCCAAA
GGCACCGTTA CCATCGCCGT GGATGGCGGC ACCTTCGGCC TGCCCATCGC CGATCTGATC
GACGTGGACG AGGAAAAGGC CCGTCTGGAA AAGACCCTCG GCAAACTCGC CAAGGAACTC
GGCGGGTTGC GTGGGCGTCT GAACAACCCC AAATTCGCCG AAAGCGCACC CGCGGAGGTG
GTGGAGGAAA CCAAAGCCAA CCTCAAAGCC CGGGAAGAGG AAGAGGCGCG CCTGAAACAG
GCCCTCGCGC GGTTGGCCGA GGTCGGTTAG
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| Protein sequence | MEKTFNAAEA EARIYAKWDR SGAFKAGANA KLGAEPFSIM IPPPNVTGVL HVGHAFNNTL
QDVLTRWHRM RGFDTLWQPG TDHAGIATQM VVERELAKSQ IQRKNLTREE FLAHVWEWKA
KSGGTIREQL KRLGASCDWS REAFTMSGAP GAPEGEEGNF HDAVIKVFVE MYNKGYIYRG
KRLVNWDPHF ETAISDLEVE NIDQPGHMWH FKYPLAGGAT YEYVETDEDG VETLRETRDY
ISIATTRPET MLGDGAVAVH PDDTRYAAIV GQLCEIPVGP KEHRRLIPII TDDYPDPSFG
SGAVKITGAH DFNDYEVAKR GNIPCYRLLD TKGALRDDGA PYAEAAAIAQ AVANGDATLG
DMDVDALNLV PDHLRGLDRF MARERIVEEI TADGLAVMTT SDDPRLGAKP KKKSGEDAQA
EEPPETEKPL VPLVEAKPIT QPFGDRSKVV IEPMLTDQWF VDTAKIVEPA LNAVRSGRTK
IIPEQHRKVY FHWLENIEPW TISRQLWWGH QIPVWYADEM ENGEVVNAGP MFCAATEQEA
LQAAQSHYGP KRVVLPESVV QQSGGRLKMD EMKTAKGNVE ISLNLEKSNY VKLRRDPDVL
DTWFSSGLWP IGTLGWPEQT PELDRYFPTS TLISGFDIIF FWVARMMMMQ LAVVDDVPFR
DVYVHALVRD EKGRKMSKSI GNVLDPLELI DEYGADALRF TLTAMAAMGR DLKLSTDRIQ
GYRNFGTKLW NAARFAEMNE CVPDPAFDPK SPTQTVNKWI ITETARARIA HDEALENYRF
NDAAGGLYQF VWGKVCDWYL EFAKPLFASG DDAVIAETRA TMAWVIDQCL ILLHPTMPFI
TEELWSEIAT RDTLLVHADW PTYGAEFTDI AAEKEMSWVI ALIESIRSAR QQMHVPAGLK
VQLLQSDLDA AGQAAFDTNQ AMITRLARLS EVTPTDAFPK GTVTIAVDGG TFGLPIADLI
DVDEEKARLE KTLGKLAKEL GGLRGRLNNP KFAESAPAEV VEETKANLKA REEEEARLKQ
ALARLAEVG
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