Gene Jann_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3474 
Symbol 
ID3935948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3526900 
End bp3527235 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content66% 
IMG OID637905848 
ProductSH3, type 3 
Protein accessionYP_511416 
Protein GI89055965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCC TTTTCGCCCG CTTTTCCCTG ATCCTCACCC TGCTGGTCGC GCTGACCTCC 
GCCGTGCAGG CCTCTGGCCA CAGCCATGGC GGCCACGGCC CCGATTTCTG GCGCGTCAGT
GGCGTCGCCA ATTGGGACGT GCTCAACGTC CGCGCCGGTC CCGGGGTGGC CTATAATGTC
GTGGATCGGT TGCCCCACAA TGCCCGCCAG GTGCAGGTCG TCAGCTGCGT GCCCATCGCC
ACCAGCCGTG GCCCGGCCAA TTGGTGTCTG GTGAACTGGC AGGGCTATCA GCGCGGCTGG
GTCAACAGCC GGTTCCTGCG CGAAGACAGC TACTAG
 
Protein sequence
MTALFARFSL ILTLLVALTS AVQASGHSHG GHGPDFWRVS GVANWDVLNV RAGPGVAYNV 
VDRLPHNARQ VQVVSCVPIA TSRGPANWCL VNWQGYQRGW VNSRFLREDS Y