| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3471 |
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| Symbol | |
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| ID | 3935945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3523497 |
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| End bp | 3524240 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637905845 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_511413 |
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| Protein GI | 89055962 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGCG AACGGGCAGA GGATCGCACA ATTCTGCGGC TGTCGGGGGC CGACGCCCAC
GGCTTCCTGC AAGGCCTCGT GACGCGCGAC GCGGGCGAGG GGTTGACCTA TTCGGCGCTG
CTCACACCCC AGGGCAAATA CCTCGCGGAT TTCTTCCTGC TGGACCGGGG CGACGACATC
CTGCTGGACG TCAAATCCGA CATCGCCCGC GCCGTGGCGC AGCGCTTGGG CATGTACCGC
CTGCGCGCCG ATGTGACGAT TGAGGAGGCC GACCTGCCCG TCGCGCGCGG TTTGGGTGAC
ATGCCCGCAG GCGCCTTCGC AGACCCCCGT GACCCGTCGC TTGGGTGGCG CGCTTACGGT
GTCGCGGGCG GCGATCCGGT GACCGATTGG ACGGCTCTGC GCGTCGCGGC CTGCGTGCCT
GAAACCGGCG TTGAGCTGAC CCCGAATGAC ACCTACATTC TGGAGGCGGG CTTTGACCGT
CTGTGCGGCG TGGACCACAA AAAGGGGTGT TATCTGGGCC AGGAAGTCAC CGCCCGAATG
AAGCACAAGA CCGAGCTGAA GAAAGGTTTT GTGACGGTCT CCGTTGACGG GACAGCTCCC
GTCGGGACAG CGATCATGGC CGGAGAGAAA CCCGCCGGAA CGCTCTATAC CCAAGCGGGC
GGGCAGGGCA TCGCCTACCT TCGGTTTGAC CGCGCGACAG GGCCCATGAC AGCCGCAGAG
GCCCGCGTGA CATGGAAGAA ATAG
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| Protein sequence | MIGERAEDRT ILRLSGADAH GFLQGLVTRD AGEGLTYSAL LTPQGKYLAD FFLLDRGDDI
LLDVKSDIAR AVAQRLGMYR LRADVTIEEA DLPVARGLGD MPAGAFADPR DPSLGWRAYG
VAGGDPVTDW TALRVAACVP ETGVELTPND TYILEAGFDR LCGVDHKKGC YLGQEVTARM
KHKTELKKGF VTVSVDGTAP VGTAIMAGEK PAGTLYTQAG GQGIAYLRFD RATGPMTAAE
ARVTWKK
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