| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3459 |
|---|
| Symbol | |
|---|
| ID | 3935933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3506625 |
|---|
| End bp | 3507719 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637905833 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_511401 |
|---|
| Protein GI | 89055950 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3673] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGGC CGTTGCGGCT GAGTGAGCGC ATATGGGGGT GGTTGCCCCG GGCACTCAAG
GGTGTTCGCC AAGCGCCCGA GCCCGCGCCG GTGGCCCACA CGCCCTGCAC CCATGTGGTG
CTGCTGGATG GGACGATGTC GTCCTTGACG CCGGGCTGCG AGACCAATAT CGGCCTGACC
TATCGCCGGC TGATGGACCT GCCGCGAGAG ACCGGCGTGC GGGTCTATTA TGAGCCGGGT
ATTCAGTGGC AGGGGATCCG CCGCGCCCAT GAGGTGATGG CGGGCATCGG GATCAATCGC
CAGATCAAGC GGGCCTATGC GTGGCTGTCT GCCTCCTACA AACCCGGGGA CCGGGTGATG
CTGATGGGAT ATTCGCGCGG GGCCTATGCG GTGCGGTCGT TGGGCGGGTT GATTGACAAC
ATGGGGCTGT TGCGGCCCGA TGCCATGACC CAGCAGCGGG TGGAAACGCT CTATGACCTC
TATCGCTCGG ACCGCGACAG CGCCCGGGCG CGGGAAATGC GGGCAGAGAA ATGCCGCGCG
GACGTGCCGG TAACGTTTCT GGGGGTCTAT GATACGGTGC GCGCCCTGGG GATGCGCTAT
CCGCTGGTCT GGCGATTTCT GCCGCTGGCC CATCCCTATC ACACCCACAC GCTCGGCGGT
CATATCGAGA CCGCGCGCCA GGCGCTTGCG CTGGATGAGA CGCGGGTCGC TTACCGGCCA
ATCCTTTGGA ACACGTCCAA TGCGGGCGCG TCGCGGGACG TGGTGCAGAT GTGGTTCAAG
GGCACCCACG GGGACATTGG CGGGCAATTG AACGGACGGG CGATGGCGCG GCCCCGGGCG
AATATATCGC TGATCTGGAT GCTGGCAGAG GCCGAGGCGG TGGGTCTGCG CTTGCCTGCG
GACTGGGCGG CCCGATTTCC GGCGGATGCC GAGGCGCCGT CGGTCGGGAA CTTCACCGGT
TTCGGGAAAT TGTTCTGGGA ACGCCGGCGG AGGGTCGTGG GCGTCGATGC ATCGGAGGCG
CTGCATCCAA CCGCGAAGGA CTGGGCGCGC GCACGGGGTG TGGCCCTGGC GGAGTTCGAG
ACGGCGACGG GTTGA
|
|---|
| Protein sequence | MTGPLRLSER IWGWLPRALK GVRQAPEPAP VAHTPCTHVV LLDGTMSSLT PGCETNIGLT
YRRLMDLPRE TGVRVYYEPG IQWQGIRRAH EVMAGIGINR QIKRAYAWLS ASYKPGDRVM
LMGYSRGAYA VRSLGGLIDN MGLLRPDAMT QQRVETLYDL YRSDRDSARA REMRAEKCRA
DVPVTFLGVY DTVRALGMRY PLVWRFLPLA HPYHTHTLGG HIETARQALA LDETRVAYRP
ILWNTSNAGA SRDVVQMWFK GTHGDIGGQL NGRAMARPRA NISLIWMLAE AEAVGLRLPA
DWAARFPADA EAPSVGNFTG FGKLFWERRR RVVGVDASEA LHPTAKDWAR ARGVALAEFE
TATG
|
|---|
| |