Gene Jann_3449 details

Gene Information

• Locus tag: Jann_3449
• Symbol: dnaG
• ID: 3935923
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 3495842
• End bp: 3497782
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637905823
• Product: DNA primase
• Protein accession: YP_511391
• Protein GI: 89055940
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.91477
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCATTGC CCCCCGGATT CCTTGACGAG CTGCGCACCC GCACCTCCAT CGCGCAAGTG 
GTGGGGCGCA AGGTGATCTG GGACAATCGC AAATCCAATC AGGCCAAGGG CGACATGTGG 
GCGCCCTGCC CGTTCCATCA GGAAAAAAGC GCCAGCTTCC ACGTCGATGA CCGCAAGGGG 
TTTTACTATT GCTTCGGCTG TCAGGCGAAG GGCGACATGT TCAAATTCGT CCAGGAGACG 
GAGAATGTGG GCTTCATGGA AGCGGTGCAG ATCCTCGCCG GTGAAGCCGG CATGCAGATG 
CCCGCGCGCG ATCCACAGGC GCAGGAAAAG GCCGACAAGG CCACGCAACT GGCCAAGGTG 
ACGGAGGCTG CGGTCCAGCA CTTTCGCCTG CAACTCAAGA CCCAGGCCGC GTCGGACGCC 
CGCGCCTATC TGGAAGGGCG CGGCATGGAT CAGGCCACGC TGGACCGGTT CGAGATCGGC 
TTTGCCCCCA ATGGCCGCAA CAGCACCCAT CAGGCGCTGG TCGATAAGGG CTTTGCCGTT 
GACGACATCA CGGCGGCCAA TGTCTCCACC AAGCCCGACG ACGGCGGCGC GCCCTATGAT 
GCGTTTCGCG ACCGGATCAT CTTTCCCATC CGCGACGCGC GCGGGCGGTG TCTGGGCTTT 
GGCGGGCGGG CGATGGACCC CAATGCGCGC GCCAAGTATC TTAATTCGCG GGAAACGCCG 
CTCTTTGACA AGGGCCGCGC GCTCTACAAT CACGGCCCCG CGCGGGAGGC AGCAGGCAAG 
GGCCAGCCCC TGATCGTGGC CGAGGGCTAC ATGGATGTCA TCGCGCTGGT GGGTGCGGGG 
TTTGAGGCCG CAGTGGCCCC CCTCGGCACC GCGGTCACGG AAGATCAGCT GCGCCTGATG 
TGGCGCATCA CCGACGAGCC GATCATCGCG CTGGACGGGG ACAAGGCGGG TCTGCGCGCC 
GCGATGCGGC TGGTGGATCT GGCAATGCCG CTGCTGGAGG GCGGAAAGAG CCTGCGCTTT 
GTGATCCTGC CCGAGGGCCA GGACCCCGAT GATCTGATCC GCGCCCAGGG GCCGGGCGCG 
ATGCAGGCGT TGCTGGACAA GGCAGAGCCG ATGGTCACGC TGCTCTGGCG GCGAGAGACG 
GAAGGCCAGG TGTTCGACAG CCCCGAGCGG CGGTCCGCCC TTGATGGGCG ATTGCGGCAG 
GCGCTGCAAC GGATCGGCGA TCCGGGCCTG CGCCGCCATT ACGGCGATGC GATTTCCGAG 
CTGCGGCGCG CCCTGTTCCG ACCGCAGCAG AAACCGTGGC AGCCCGGGAA AAGAGGCCCG 
TGGAAAGGCC GTGGCTTCGC GGAGGCGCAG GCGCCCCTGG CCGCCACGCG CGCCCGCGTC 
GGTGCGCTGA GCGGGGAGAC CCTGCGCACC GGGTTGATCG TGGCCACCTG CATCCGGTTC 
CCCGATCTGA TTGATGTGTT CGAGCCGCAG CTTGACCGCA TGAACCCCCG CGATCCCGAT 
CACGCGCGCC TCACCGCCCA TCTGTTGCGG ACCCAAAACC GGGAGGCCGC GACCCTGTTG 
GACGAAATAA ATGCTTCCCC CCTCGCGCCC GCCCTTGAAA GCCTCTTGCG GCTTTCCCAT 
CTCGCGATCA CGCCGTTCTT GATCGGCGCG GGAGATCGCG CGCGCGCGGA AGATTGCCTG 
GAAGAGGAAT TTGCGCGGCT CACCGCTGCA CGGGCCATTG AGGATGAGAT GGTGGAGGCC 
AGCCAGGACG TGGAAGCCGC GCCAGATGAA GGGGACCCGG CGCTGGCCTA CCGCATGAAA 
GAGGCTTTGC GCGGCAAGCA CGCGGCCCAA AGTCCCAAAG GCGAGGATAA CGCTGAACAA 
TTCGGGGAAA CGTCCGAGGC ACGCTCGGCC TTCCACCAGT TGCTCTCGAC GGCCGGACAG 
GGCAAGAAAT TAAGGAAATA G 

 

Protein sequence

MSLPPGFLDE LRTRTSIAQV VGRKVIWDNR KSNQAKGDMW APCPFHQEKS ASFHVDDRKG 
FYYCFGCQAK GDMFKFVQET ENVGFMEAVQ ILAGEAGMQM PARDPQAQEK ADKATQLAKV 
TEAAVQHFRL QLKTQAASDA RAYLEGRGMD QATLDRFEIG FAPNGRNSTH QALVDKGFAV 
DDITAANVST KPDDGGAPYD AFRDRIIFPI RDARGRCLGF GGRAMDPNAR AKYLNSRETP 
LFDKGRALYN HGPAREAAGK GQPLIVAEGY MDVIALVGAG FEAAVAPLGT AVTEDQLRLM 
WRITDEPIIA LDGDKAGLRA AMRLVDLAMP LLEGGKSLRF VILPEGQDPD DLIRAQGPGA 
MQALLDKAEP MVTLLWRRET EGQVFDSPER RSALDGRLRQ ALQRIGDPGL RRHYGDAISE 
LRRALFRPQQ KPWQPGKRGP WKGRGFAEAQ APLAATRARV GALSGETLRT GLIVATCIRF 
PDLIDVFEPQ LDRMNPRDPD HARLTAHLLR TQNREAATLL DEINASPLAP ALESLLRLSH 
LAITPFLIGA GDRARAEDCL EEEFARLTAA RAIEDEMVEA SQDVEAAPDE GDPALAYRMK 
EALRGKHAAQ SPKGEDNAEQ FGETSEARSA FHQLLSTAGQ GKKLRK