| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3448 |
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| Symbol | |
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| ID | 3935922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3495122 |
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| End bp | 3495703 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637905822 |
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| Product | sarcosine oxidase, gamma subunit |
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| Protein accession | YP_511390 |
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| Protein GI | 89055939 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4583] Sarcosine oxidase gamma subunit |
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| TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGATA CGACCCCACC TAAGTTGACC CCGGCTAAAC TGAGCGCAGC CAAACTGACC
GCCAGGACCC CGTTCGCGGG GCTGCTTCCG ATCTCGGAGG GCGCCACCAC GCTGTCAGAG
GTGACGCACG ACGCGATCAC GTGGATCTCA CCGGCCAAGG GCAAGATGGC CACCGTATCC
AAGGCCCTGG CCAAGCAGAC GGGCGCGTCG TTTCCCGATC CCGGCCGGAT TGAAGGCGCT
GCCGTCTGGA GCGGCCCGGG CCAGGCTTTG CTCCTCGGGC CGACGTTCAA GCCGATCAAG
GGCGCGGCGG CCTCTGACCA GAGCAGCGCC TGGGCCTGCT GCGCGCTGAA CGGTCCCGAT
GCGCGCGCCG TGCTGGCCCG GCTGGTGCCC ATCGACCTGC GGCCCGAGAG CTTCGCGGAA
GGTCACGTCG CCCGCACCCT TCTGGGCCAC ATGAATTGCG TGCTGCTGCA CCGAAGCGCA
GATCGCTATG AGATCATGGT CTTCCGCTCG ATGGCCACCA CCGCCGCCCA TGAGATCGCG
GAGGCCATGG CACTGGTCGC GGCCCGGTCC CGACATCTTT AA
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| Protein sequence | MADTTPPKLT PAKLSAAKLT ARTPFAGLLP ISEGATTLSE VTHDAITWIS PAKGKMATVS
KALAKQTGAS FPDPGRIEGA AVWSGPGQAL LLGPTFKPIK GAAASDQSSA WACCALNGPD
ARAVLARLVP IDLRPESFAE GHVARTLLGH MNCVLLHRSA DRYEIMVFRS MATTAAHEIA
EAMALVAARS RHL
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