| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3445 |
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| Symbol | |
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| ID | 3935919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3490672 |
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| End bp | 3491925 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905819 |
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| Product | sarcosine oxidase beta subunit family protein |
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| Protein accession | YP_511387 |
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| Protein GI | 89055936 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.473565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.59391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATATT CCGGGCTTCA AGTGCTCTGG CAGGGCCTGA CGGGCAACAA GGGCTGGACG
CCCGCCTGGC GCGATCCCGA TCCGAAGCCC GAGTATGACA TCATCATCAT CGGCGGCGGC
GGTCACGGGC TGGCGACGGC CTATTATCTC GCCAAGGAAC ATGGCCTGAC GAATATCGCC
GTGGTCGAGA AGGGCTATCT GGGCGGCGGC AATGTGGGCC GGAACACCAC GATTGTGCGG
GCGAACTATG GGCTGCCCGG CAATTCCGAG TTCTACAGCC ATTCCCTGAA ATTGTGGGAG
GGGCTGGAGC AGGACCTCAA TTACAACGCG ATGCATTCCC AGCGTGGCGT GCTCAACCTG
TTTCATTCCG ATGGCCAGCG CGACGCCTAT GCCCGGCGCG GCAATACGAT GATCAATCAG
GGCGATGATG CCGTTCTGCT GGACAGGGAG GGCGTGCGCC GCATGGTCCC CTACCTGGAT
TTTGAGCAGA CGCGCTTCCC GATCTTCGGT GGTCTCTATC AGGGGCGCGG CGGCACGGCA
CGGCACGACG CGGTGGCGTG GGGCTTTGCG CGCGGCGCCG ATCAGCGCGG GGTCGATCTG
ATCCAGAATT GCGAAGTCAC CGGCATTGAT ATTGAGAACG GGGCCGTGCG CGGCATTCAG
ACGACCCGGG GCGCGATCCG CGCCAAGAAA GTCGGCATGG TCGTGGCCGG GCGCTCGTCA
CAATTGGCCG CGATGGCCGG GATGCGGTTG CCGATTGAAA GCCACGTTTT GCAGGCCTTC
GTGACCGAGG GGCTGAAGCC GATTATCGAC ACCGTGATTA CCTACGGCAT GGGCCATTTC
TACATCAGCC AGTCCGACAA GGGCGGGCTG GTCTTTGGCG GTGATCTGGA TTTCTACGCG
TCCTATGCGG CGCGCGGCAA CCTGCCCATG GCCGAACATG TGGTGGAGGC CGGAATGACC
CTGATGCCGA TGATCGGAAA GGCGAAGATG CTGCGGTCCT GGGGCGGGAT CATGGACATG
TCGTCCGACG GCTCGCCGAT CCTCGACAAG ACCCATATCG ACGGGCTCTA CGTCAACGGC
GGATGGTGTT ATGGCGGGTT CAAGGCCGTG CCCGCCTCCG GCCATTGCTT CGCGCATCTG
ATGGCCACCG ACCGCCCCCA CGCCGTCGCC GCCAAACATC GGTTGGATCG CTTCACCACG
GGCCGCGGCC TGATGGATGA AGAGGGCACC GGCAGCCAGC ACAATCTGCA CTGA
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| Protein sequence | MRYSGLQVLW QGLTGNKGWT PAWRDPDPKP EYDIIIIGGG GHGLATAYYL AKEHGLTNIA
VVEKGYLGGG NVGRNTTIVR ANYGLPGNSE FYSHSLKLWE GLEQDLNYNA MHSQRGVLNL
FHSDGQRDAY ARRGNTMINQ GDDAVLLDRE GVRRMVPYLD FEQTRFPIFG GLYQGRGGTA
RHDAVAWGFA RGADQRGVDL IQNCEVTGID IENGAVRGIQ TTRGAIRAKK VGMVVAGRSS
QLAAMAGMRL PIESHVLQAF VTEGLKPIID TVITYGMGHF YISQSDKGGL VFGGDLDFYA
SYAARGNLPM AEHVVEAGMT LMPMIGKAKM LRSWGGIMDM SSDGSPILDK THIDGLYVNG
GWCYGGFKAV PASGHCFAHL MATDRPHAVA AKHRLDRFTT GRGLMDEEGT GSQHNLH
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