Gene Jann_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3443 
Symbol 
ID3935917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand+ 
Start bp3489317 
End bp3489868 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content57% 
IMG OID637905817 
Producthypothetical protein 
Protein accessionYP_511385 
Protein GI89055934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.142737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTCC TGATCCAAAA ATTCCTTCGC GATACATCGG CAGCGGTCTC TCTTGAGACG 
GTCATTATCT TTCCCATTCT GATCTGGGCG TGGATCGGTA CCTTCGCGTT CTTCGATGCG 
TATCGGGTCT ACAACACCTC GATCAAGGCG ACCTTCACGA TTGCGGACCT GATCTCTCGC 
CAGCAGAAAT CAGAACGTGT CGAGGAAGAC GACCTTGATG GCATGTCCGA GATGCTGGCG 
CTGATGGTGC GCGGCACCGA TGGGGTGGAG ATGCGCGTGA CCCAGATCCA GCGCCTGGTA 
TCCGGCGGAT ATTGCGTCAA CTACAGCTAT GGCACCGGAT CGCAAGCCCG TCTGTTCAAC 
GCGAACCTCC CCGCAATGCA GGACCGCATC CCCGATATGG CGACCGGCGA ATATGTGGTG 
CTGGTCGAAA GTTTCATCGA CTATGCCCCG TCGTTCAACG TGGGCCTGAA CGACCTGACG 
TTTGAGAACT TCACACTGAC ACGCCCCCGC AATGGCCAGG TCCCCTTCCC CGGCAGAGGC 
TGTGAATTGT AG
 
Protein sequence
MKLLIQKFLR DTSAAVSLET VIIFPILIWA WIGTFAFFDA YRVYNTSIKA TFTIADLISR 
QQKSERVEED DLDGMSEMLA LMVRGTDGVE MRVTQIQRLV SGGYCVNYSY GTGSQARLFN 
ANLPAMQDRI PDMATGEYVV LVESFIDYAP SFNVGLNDLT FENFTLTRPR NGQVPFPGRG 
CEL