| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3440 |
|---|
| Symbol | |
|---|
| ID | 3935914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3485258 |
|---|
| End bp | 3486691 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637905814 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase, C terminal |
|---|
| Protein accession | YP_511382 |
|---|
| Protein GI | 89055931 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA ACCGGACAGA GCCTAGTTTC AGACAATCCG TTGATTTGAT GTTCAACCGG
GCCGCCGCCC TTCTGGACCT GCCGCCGGGG TTGGAGGAAA AGATACGCGT CTGCAATTCC
ACCTACACGG TGCGGTTTGG CGTGAAACTT CGCGGCGAGG TGCGGACATT CACGGGCTAC
CGCTCTGTCC ATTCCGAGCA TACCGAGCCC GTGAAGGGCG GCATCCGCTA TTCGCTTGGC
GTGAACCAGG ATGAGGTGGA GGCGCTGGCC GCGCTGATGA CCTATAAATG CGCGCTGGTG
GAGGCGCCGT TCGGCGGGTC CAAGGGGGGC CTGTGCATCG ACCCGCGGGA ATATGACAAC
GATGAGTTGG AAAAGATCAC CCGCCGCTTC GCCTATGAGC TGATCAAGCG CGACCTGATC
GACCCGGCCC AGAACGTGCC CGCCCCCGAT ATGGGCACCG GAGAGCGCGA GATGGCGATC
ATGGCCGATC AATATGCGCG GATGAACACG ACCGATATCA ACGCGCGCGC CTGCGTCACC
GGCAAACCGC CCCATGCGGG CGGCATCCAG GGCCGGGTGG AGGCCACGGG CCGCGGGGTG
CAATACGCTT TGCAGGAATT CTTCCGCCAC CCCGAAGACA TCGCCAAGGC GGGCATGGAC
GGCTCGTTGG ATGGCAAGCG GGTCATTGTC CAGGGTCTGG GCAATGTGGG CTATCACGCG
GCGAAGTTCC TGAGCGAGGA AGACGGCTCC ATCGTCACCC ATGTGATCGA GCGGGATGGC
GCAATTCATG ACCCCAGCGG GATCAATATC GACGAGTTGC ACAACTGGAT CGCCCATCAC
GGCGGTGTGA AGGGCTTCCC CAACGGCAGC TACGATGAGA ACGGCAATGC TGCCCTGGAG
GAGGAGTGCG ATATCCTGAT CCCGGCGGCT CTGGAGGGCG TGATCAACCT GGGCAACGCT
GCCAATATCA AGGCGAAACT CATCATCGAG GCGGCCAACG GTCCGGTCAC GGCGGGCGCG
AACGATATCC TGCTGGAGCG CGGTGTGATC ATCATCCCCG ACCTCTATGC CAATGCGGGC
GGCGTGACGG TGTCCTACTT CGAGTGGGTC AAGAACCTGA GCCACATCCG CTTTGGCCGT
ATGCAGCGCC GTCAGGAAGA GGCGCGCCAC CAGTTGATCG TGGATGAGTT GCAGCGCCTG
GATCAGCATC TGGGCGGGGC CTGGTCCATG ACCCCGAATT TCAAGCAGAA GTATCTGCGC
GGGGCGGGTG AACTGGAGCT GGTCCGCTCG GGCCTCGACG ATACCATGCG AGAGGCCTAC
GCCGCGATGC GCAGCGTGTG GTATGAGCGC GACGATGTGC ATGATCTGCG CACGGCGGGG
TTCCTGGTGT CGATCAACCG GGTGGCGTCG AGCTATCAGG CCAAGGGCAT CTGA
|
|---|
| Protein sequence | MTTNRTEPSF RQSVDLMFNR AAALLDLPPG LEEKIRVCNS TYTVRFGVKL RGEVRTFTGY
RSVHSEHTEP VKGGIRYSLG VNQDEVEALA ALMTYKCALV EAPFGGSKGG LCIDPREYDN
DELEKITRRF AYELIKRDLI DPAQNVPAPD MGTGEREMAI MADQYARMNT TDINARACVT
GKPPHAGGIQ GRVEATGRGV QYALQEFFRH PEDIAKAGMD GSLDGKRVIV QGLGNVGYHA
AKFLSEEDGS IVTHVIERDG AIHDPSGINI DELHNWIAHH GGVKGFPNGS YDENGNAALE
EECDILIPAA LEGVINLGNA ANIKAKLIIE AANGPVTAGA NDILLERGVI IIPDLYANAG
GVTVSYFEWV KNLSHIRFGR MQRRQEEARH QLIVDELQRL DQHLGGAWSM TPNFKQKYLR
GAGELELVRS GLDDTMREAY AAMRSVWYER DDVHDLRTAG FLVSINRVAS SYQAKGI
|
|---|
| |