Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3431 |
Symbol | |
ID | 3935905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3477854 |
End bp | 3479653 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637905805 |
Product | GTP-binding protein LepA |
Protein accession | YP_511373 |
Protein GI | 89055922 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.116192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC TCAATCGCAT CCGCAACTTC TCCATCGTCG CCCACATCGA CCACGGGAAA TCCACGCTGG CGGATCGTTT GATCCAGCTG ACCGGCACCG TGGCCGCGCG CGATATGCAG GCGCAGCTCC TAGATCAGAT GGATATCGAG CGGGAGCGCG GAATTACCAT CAAGGCCAAC ACCGTCCGCA TCGAATACCC GGCGAAGGAC GGCCACACCT ATATCCTCAA CCTCATCGAC ACGCCCGGCC ACGTCGATTT CGCCTATGAG GTCAGCCGCT CCATGCAGGC GGTCGAGGGC TCCCTGCTGG TCGTCGATGC CTCCCAGGGG GTGGAGGCGC AAACGCTCGC CAACGTCTAT CAGGCCATCG ACGCGGATCA TGAGATTGTG CCGGTCCTCA ACAAGGTCGA CCTGCCCGCC GCAGAGCCCG ACCGGGTGCG CGAGCAGATC GAAGACGTCA TCGGCATCGA CGCCTCGGAA GCCGTTGAAA TCTCCGCCAA AACCGGCATC GGCATCCCCG ATGTGCTGGA GGCCATCGTC ACCCGCCTGC CTGCCCCCAA GGGCGACCGC GACGCGCCGC TGAAGGCCAT GCTGGTGGAC AGCTATTATG ACAGCTATCT GGGCGTCGTT GTCCTGATCC GCGTCATCGA CGGGGTCATC AAGAAGGGCG ACAAGATCAA GATGATGCGC ACCGGCGGGC AGTATCCCGT TGACAGGCTT GGGGTGTTCA CGCCCAAGAT GAAAGATATC GGAGAGCTTG GTCCGGGCGA AATGGGGTTC CTGACCGCCT CCATCAAACA GGTGCGTGAC ACGCGGGTGG GCGACACGAT CACCCATGAC AAACACGGCG CCGAGCAGCC GCTTGCGGGC TTCAAACCCT CCCAGCCCGT GGTCTTCTGC GGCCTCTTCC CCGTGGACAC CAACCAGTTT GAGGACCTAC GCGACGCCAT CGAAAAGCTC GCCCTCAACG ACGCGAGTTT CTCCCACGAG ATGGAGACAT CTGCCGCCCT CGGCTTCGGC TTCCGCTGCG GGTTCCTGGG CCTGCTGCAC CTCGAAGTGA TCCGCGACCG GTTGGAGCGC GAATACGATA TCGACCTGAT CACCACCGCG CCCTCGGTCA TCTACCACGT CCACATGCGC GACGAGACCA TGGTGGACCT GCACAACCCC GCCGACATGC CCGACCCCGC CGCGATTGAC CGCATCGAGG AGCCGCGCAT CAAGGCCACG ATCCTGGTCC CCGACGACTA CCTCGGCGAT GTCCTGAAAC TCTGCCAGGA CCGGCGCGGC ATCCAGATCG ACCTCACCTA CGCCGGCACC CGCGCGATGG TCGTCTACGA CCTGCCCCTG AACGAGGTGG TCTTCGACTT CTACGATAGG CTGAAAAGTG TGACCAAAGG GTATGCGTCC TTCGATTATC AGATGATCGG CTACCGCGAG GATGCGCTGG TCAAGATGCA GGTGCTGGTG AATGACGAGC CGGTCGACGC CCTCTCGATC ATGGTCCACC GTGACAGGGC CGAGACCCGG GGCCGCGCGA TGGTCGAAAA ACTCAAGGAC CTCATCCCCC GCCACATGTT CAAGATCCCG ATCCAGGCGG CGATTGGCGG GCGTGTAATT GCGCGTGAAA CGCTATCCGC CATGCGCAAG GACGTGACGG CGAAGTGCTA TGGCGGCGAC GCGTCCCGGA AGCGGAAGCT GCTGGACAAG CAGAAGGCCG GTAAGAAGAA AATGCGGCAG TTCGGGAAAG TCGAAATTCC CCAATCCGCC TTCATTTCCG CTCTCAAGAT GGACGGCTAG
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Protein sequence | MTDLNRIRNF SIVAHIDHGK STLADRLIQL TGTVAARDMQ AQLLDQMDIE RERGITIKAN TVRIEYPAKD GHTYILNLID TPGHVDFAYE VSRSMQAVEG SLLVVDASQG VEAQTLANVY QAIDADHEIV PVLNKVDLPA AEPDRVREQI EDVIGIDASE AVEISAKTGI GIPDVLEAIV TRLPAPKGDR DAPLKAMLVD SYYDSYLGVV VLIRVIDGVI KKGDKIKMMR TGGQYPVDRL GVFTPKMKDI GELGPGEMGF LTASIKQVRD TRVGDTITHD KHGAEQPLAG FKPSQPVVFC GLFPVDTNQF EDLRDAIEKL ALNDASFSHE METSAALGFG FRCGFLGLLH LEVIRDRLER EYDIDLITTA PSVIYHVHMR DETMVDLHNP ADMPDPAAID RIEEPRIKAT ILVPDDYLGD VLKLCQDRRG IQIDLTYAGT RAMVVYDLPL NEVVFDFYDR LKSVTKGYAS FDYQMIGYRE DALVKMQVLV NDEPVDALSI MVHRDRAETR GRAMVEKLKD LIPRHMFKIP IQAAIGGRVI ARETLSAMRK DVTAKCYGGD ASRKRKLLDK QKAGKKKMRQ FGKVEIPQSA FISALKMDG
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