| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3431 |
|---|
| Symbol | |
|---|
| ID | 3935905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 3477854 |
|---|
| End bp | 3479653 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637905805 |
|---|
| Product | GTP-binding protein LepA |
|---|
| Protein accession | YP_511373 |
|---|
| Protein GI | 89055922 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0481] Membrane GTPase LepA |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.116192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC TCAATCGCAT CCGCAACTTC TCCATCGTCG CCCACATCGA CCACGGGAAA
TCCACGCTGG CGGATCGTTT GATCCAGCTG ACCGGCACCG TGGCCGCGCG CGATATGCAG
GCGCAGCTCC TAGATCAGAT GGATATCGAG CGGGAGCGCG GAATTACCAT CAAGGCCAAC
ACCGTCCGCA TCGAATACCC GGCGAAGGAC GGCCACACCT ATATCCTCAA CCTCATCGAC
ACGCCCGGCC ACGTCGATTT CGCCTATGAG GTCAGCCGCT CCATGCAGGC GGTCGAGGGC
TCCCTGCTGG TCGTCGATGC CTCCCAGGGG GTGGAGGCGC AAACGCTCGC CAACGTCTAT
CAGGCCATCG ACGCGGATCA TGAGATTGTG CCGGTCCTCA ACAAGGTCGA CCTGCCCGCC
GCAGAGCCCG ACCGGGTGCG CGAGCAGATC GAAGACGTCA TCGGCATCGA CGCCTCGGAA
GCCGTTGAAA TCTCCGCCAA AACCGGCATC GGCATCCCCG ATGTGCTGGA GGCCATCGTC
ACCCGCCTGC CTGCCCCCAA GGGCGACCGC GACGCGCCGC TGAAGGCCAT GCTGGTGGAC
AGCTATTATG ACAGCTATCT GGGCGTCGTT GTCCTGATCC GCGTCATCGA CGGGGTCATC
AAGAAGGGCG ACAAGATCAA GATGATGCGC ACCGGCGGGC AGTATCCCGT TGACAGGCTT
GGGGTGTTCA CGCCCAAGAT GAAAGATATC GGAGAGCTTG GTCCGGGCGA AATGGGGTTC
CTGACCGCCT CCATCAAACA GGTGCGTGAC ACGCGGGTGG GCGACACGAT CACCCATGAC
AAACACGGCG CCGAGCAGCC GCTTGCGGGC TTCAAACCCT CCCAGCCCGT GGTCTTCTGC
GGCCTCTTCC CCGTGGACAC CAACCAGTTT GAGGACCTAC GCGACGCCAT CGAAAAGCTC
GCCCTCAACG ACGCGAGTTT CTCCCACGAG ATGGAGACAT CTGCCGCCCT CGGCTTCGGC
TTCCGCTGCG GGTTCCTGGG CCTGCTGCAC CTCGAAGTGA TCCGCGACCG GTTGGAGCGC
GAATACGATA TCGACCTGAT CACCACCGCG CCCTCGGTCA TCTACCACGT CCACATGCGC
GACGAGACCA TGGTGGACCT GCACAACCCC GCCGACATGC CCGACCCCGC CGCGATTGAC
CGCATCGAGG AGCCGCGCAT CAAGGCCACG ATCCTGGTCC CCGACGACTA CCTCGGCGAT
GTCCTGAAAC TCTGCCAGGA CCGGCGCGGC ATCCAGATCG ACCTCACCTA CGCCGGCACC
CGCGCGATGG TCGTCTACGA CCTGCCCCTG AACGAGGTGG TCTTCGACTT CTACGATAGG
CTGAAAAGTG TGACCAAAGG GTATGCGTCC TTCGATTATC AGATGATCGG CTACCGCGAG
GATGCGCTGG TCAAGATGCA GGTGCTGGTG AATGACGAGC CGGTCGACGC CCTCTCGATC
ATGGTCCACC GTGACAGGGC CGAGACCCGG GGCCGCGCGA TGGTCGAAAA ACTCAAGGAC
CTCATCCCCC GCCACATGTT CAAGATCCCG ATCCAGGCGG CGATTGGCGG GCGTGTAATT
GCGCGTGAAA CGCTATCCGC CATGCGCAAG GACGTGACGG CGAAGTGCTA TGGCGGCGAC
GCGTCCCGGA AGCGGAAGCT GCTGGACAAG CAGAAGGCCG GTAAGAAGAA AATGCGGCAG
TTCGGGAAAG TCGAAATTCC CCAATCCGCC TTCATTTCCG CTCTCAAGAT GGACGGCTAG
|
|---|
| Protein sequence | MTDLNRIRNF SIVAHIDHGK STLADRLIQL TGTVAARDMQ AQLLDQMDIE RERGITIKAN
TVRIEYPAKD GHTYILNLID TPGHVDFAYE VSRSMQAVEG SLLVVDASQG VEAQTLANVY
QAIDADHEIV PVLNKVDLPA AEPDRVREQI EDVIGIDASE AVEISAKTGI GIPDVLEAIV
TRLPAPKGDR DAPLKAMLVD SYYDSYLGVV VLIRVIDGVI KKGDKIKMMR TGGQYPVDRL
GVFTPKMKDI GELGPGEMGF LTASIKQVRD TRVGDTITHD KHGAEQPLAG FKPSQPVVFC
GLFPVDTNQF EDLRDAIEKL ALNDASFSHE METSAALGFG FRCGFLGLLH LEVIRDRLER
EYDIDLITTA PSVIYHVHMR DETMVDLHNP ADMPDPAAID RIEEPRIKAT ILVPDDYLGD
VLKLCQDRRG IQIDLTYAGT RAMVVYDLPL NEVVFDFYDR LKSVTKGYAS FDYQMIGYRE
DALVKMQVLV NDEPVDALSI MVHRDRAETR GRAMVEKLKD LIPRHMFKIP IQAAIGGRVI
ARETLSAMRK DVTAKCYGGD ASRKRKLLDK QKAGKKKMRQ FGKVEIPQSA FISALKMDG
|
|---|
| |