Gene Jann_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3425 
Symbol 
ID3935899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3472638 
End bp3473435 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content64% 
IMG OID637905799 
Producthypothetical protein 
Protein accessionYP_511367 
Protein GI89055916 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.130437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGGG CCTTCCGCTT CTGGACGGGT CGGGCGCGGC CATCGCGGCC CCCGATTGTC 
TGGCCTGTCA CCTCACCGTT GCATTTCTGT CGCCCACACC GCCCTTTGCG ACAGCGCCCT
CCCATCTGCT TCGCCCCGCG AAGCCTGCCG TCACACCCGG TCTCTCCCCC CGTGTCGTCC
ATCTGGGCGC TCAAGCCCGT GCGCCCCCGC GCGCGGCCTG AGCCTCACCA GATCCAATCG
ACACAGACAA GAGAGACCAG CATGACCTTC AAAACCACGC TCCTCGCCGC CGCCTTCGCG
GTGTTCCCCG CCCTTGCATC CGCCCATATG GTGATCGAGG ACGCCTACGC CCGCGCCTCC
AGCCCCGTGG CCCAATCCGG CGCGGCCTTC ATGACCATCT TCAACCACAA CGATTTCGAC
GACCGCCTGA TCGGCGTGAC CTCCACCGCC GCCGAGCGGT TGGAACTGCA CACCCACATC
ATGGAAGAGA ACGGCGTCAT GCGCATGGTG GAGGTTGAAG AGGGCTTCCC CATTGCCGCC
GGCGAGACCA TCGCATTGGA GCGCGGCGGG ATGCATGTTA TGCTTCTGGG CCTGACCGAA
CCCCTGGTCC AGGGTGAAGA GATCGAGATC ACCTTCACAT TTGAAACCTC TGATCCGGTC
ACGCACATTA TCACCATCGA CAACGAACGT CAGCCCGCAG AGGGCGGTCA TGGCGACCAC
AGCGGCCACG GTGATCACAG CGGCCACGGT GATATGGACA CCGAAGACGA TCATTCCGGC
CACAGCACCG ACGGCTGA
 
Protein sequence
MPRAFRFWTG RARPSRPPIV WPVTSPLHFC RPHRPLRQRP PICFAPRSLP SHPVSPPVSS 
IWALKPVRPR ARPEPHQIQS TQTRETSMTF KTTLLAAAFA VFPALASAHM VIEDAYARAS
SPVAQSGAAF MTIFNHNDFD DRLIGVTSTA AERLELHTHI MEENGVMRMV EVEEGFPIAA
GETIALERGG MHVMLLGLTE PLVQGEEIEI TFTFETSDPV THIITIDNER QPAEGGHGDH
SGHGDHSGHG DMDTEDDHSG HSTDG