| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3420 |
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| Symbol | |
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| ID | 3935894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3467291 |
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| End bp | 3469342 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637905794 |
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| Product | capsule polysaccharide biosynthesis |
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| Protein accession | YP_511362 |
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| Protein GI | 89055911 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTCG CAGGCGATAG CGGCACGGAG CCTTCCGAGG CCCCGTCCGC GCCCCGCCGC
CGTGCCTATC ACTACAATGC AGGTTTCCTG ACCAACACGC GCGTGCGCCG CATCCTGGCG
TTGGCGGGCT ATGACTTGAA GCTCGGCACA CCGGACGCGG CGGATGACGT CATCGTCTGG
GGCCATTCCC CCTATGCGCC GCGCGGTGAG GCTGTGGCCG ACAGCACCGG CGCCCATCTG
GTGCGGGTGG AGGATGCGTT CCTGCGCTCC CTCCGTCCGG GCCGTTCCGG CGAGCCGCCT
CTGGGCCTCG TGATCGACCG GCGCGGCATG TATTTCGATG CCACGCGCGC CTCGGATCTG
GAACATATCC TGGCCACGCA CCCCTTTGAT GACACGGCGC TCTTGAACCG CGCCCGCGAT
GTCATGGCCC GGATGGCCGA GGGGCATCTG TCGAAATACG CCGCGACGGA CCCGGCACTG
GATCCGCCCG CGCCCGGTTA CGTTCTGCTG ATCGACCAGA CCAAAGGCGA CGCCTCCATC
CAGCTCGGTC AAGCCACGCC CGACAGCTTT GCCGAGGCGC TGACCTGGGC CCGCGAAGAC
CATCCCGACG CCCATATCGT CGTCAAGACC CACCCCGAAA CCCGCGACGG CCACCGCCCC
GGTCACTTTG ACCCGGACGG ACTGCCGCCC AATGTCTCTC TCGATGATCG CCCGATCAGC
CTTTGGCGCA TGTTTGAAGG CGCGCGGGCC GTTTATACCG TGACCTCCCA AGCGGGGTTC
GAGGCGATCC TGGCGGGCCA CAAGCCAGTC ACCTTCGGCG TGCCGTTCTA TGCCGGATGG
GGTCTGACCG ATGACCGCCG CCCGGTGCCC GTCCGTCGCC AACGGGTGCT GACCCGCGCG
CAATTGGTCG CCGGGGCGCT GTTGCTCTAC CCCACATGGT ACGACCCCTA CCGCGACGGG
TTGGGAGAGG TCGAAGACAC CCTCGGCGCG TTGGAGGCCC AGGCCCGCAG CTGGCGAGAG
GACCGCGCGG GCTACACCGC CATCGGGATG AGCCGTTGGA AAAGGGGGCA TTTGCGGGCC
GGGTTCGGCC AACACGGGCC GCTGGACTTC GCCGATCAGC CTGTCGCAGG GCGGCCGACG
CTGGTCTGGG CCGGGAAGGA AACGTCTGAG CTTCAGGCCG CCTGCGGTGA CGCGCACCTG
CTGCGGATGG AAGACGGGTT CCTGCGGTCG CGCGGTCTGG GGGCCGATCT TGTGCCGCCC
CTGTCCCTCG TTCTCGACGA CCTCGGCATC TACTACGACC CCACGCGCGA GAGCCGGTTG
GAGCGGTTGA TTGCAGAGGC CGCAGCCCTT CCTCCCGCAC GCCTGGACCG GGCGGAGCGT
CTTATCCAGA CCCTGCGTCG AACGGGTCTG ACCAAGTACA ATCTGCCCGG CGGGGCGCTG
CCGGATATTC CCCCGGATCG ACCATTGGTC CTTATCCCGG GACAGGTCGA AGATGACGCC
TCCATCCGAC TCGGCGCAGG CGCGATCACC ACCAACGCCG CGCTGTTGGC CGAGGCGCGC
AGGCTCCACC CGGGCGCCTA TCTCATCTAC AAGCCCCACC CCGATGTGGA GGCCGGATTG
CGCATCGGGG TCCTTCCGGA GGAGGCGCGC CACCTGGCCG ATCATATCGC CGAGACGACT
GGGGCGGAGG CGCTGTTGGC CCTCTCCCCC CACGTCATCA CCATGACCTC CGCTATGGGA
TTTGAAGCGC TGATCCGGGG CCTTCCCGTC ACGACCCTCG GCGCGCCGTT CTATGCCGGA
TGGGGCCTGA CGACGGACCT CGGTGACGTG CCCCCGCGCC GCACGGCCCG CCCCTCCCTG
GCCGCGCTCG TCCACGCCGC GCTGATCACC TATCCCCGCT ACATGGACCC TCGCACCGGC
CTGCCCTGCC CCGTCGAAAT CGCGGTCGAG CGGCTGTCAT CCGGCGAGGG TATGCCGTCC
AAACCGATCC TGCGTATCGT GGCAAAATTG CAAATCTGGC TGTCCGGTCA ATCCCGGCTC
TGGCGTCGGT AG
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| Protein sequence | MALAGDSGTE PSEAPSAPRR RAYHYNAGFL TNTRVRRILA LAGYDLKLGT PDAADDVIVW
GHSPYAPRGE AVADSTGAHL VRVEDAFLRS LRPGRSGEPP LGLVIDRRGM YFDATRASDL
EHILATHPFD DTALLNRARD VMARMAEGHL SKYAATDPAL DPPAPGYVLL IDQTKGDASI
QLGQATPDSF AEALTWARED HPDAHIVVKT HPETRDGHRP GHFDPDGLPP NVSLDDRPIS
LWRMFEGARA VYTVTSQAGF EAILAGHKPV TFGVPFYAGW GLTDDRRPVP VRRQRVLTRA
QLVAGALLLY PTWYDPYRDG LGEVEDTLGA LEAQARSWRE DRAGYTAIGM SRWKRGHLRA
GFGQHGPLDF ADQPVAGRPT LVWAGKETSE LQAACGDAHL LRMEDGFLRS RGLGADLVPP
LSLVLDDLGI YYDPTRESRL ERLIAEAAAL PPARLDRAER LIQTLRRTGL TKYNLPGGAL
PDIPPDRPLV LIPGQVEDDA SIRLGAGAIT TNAALLAEAR RLHPGAYLIY KPHPDVEAGL
RIGVLPEEAR HLADHIAETT GAEALLALSP HVITMTSAMG FEALIRGLPV TTLGAPFYAG
WGLTTDLGDV PPRRTARPSL AALVHAALIT YPRYMDPRTG LPCPVEIAVE RLSSGEGMPS
KPILRIVAKL QIWLSGQSRL WRR
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