Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3392 |
Symbol | |
ID | 3935865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3444159 |
End bp | 3445982 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637905765 |
Product | peptidase M3B, oligoendopeptidase-related clade 3 |
Protein accession | YP_511334 |
Protein GI | 89055883 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1164] Oligoendopeptidase F |
TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.935472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTGA CCTACCCCGC CCCGCTCCGT GATGCCGCTG CTGAAACCGG GGGCGCACCG TTGGAGGGTT TGCCCGTGTG GGATCTGAGC GATCTTTATG AGGGGCAGGA TGCCGCGAGC CTGAAACGGG ATCTGGACTG GCTGGAGGAG GCCTGTCAGT CCTTCGCCGC GGACTATGAG GGCAAACTGG CCGATCTGGA CGCCGATGGC CTGCTGGACT GCACCCTGCG CTATGAGAAG ATCGACATGA TCGCGGGCCG TATCATGTCG TTTGCCGGTC TGCGCTACTA CCAGAAGACC ACCGACGGCG AGCGCGCCAA ATTCATGTCC GACATGCAGG ACAAGATCAC CACCTACACA ACGCCGCTGG TGTTTTTCTC CCTCGAATTC AACCGGATCG AGGATGCGCA GTATGATGCG ATGATGGACA AGAACGCGGA TCTTGCGCGC TACAAGCCCG TCTTTGACCG CATGCGCGCG ATGAAGCCCT ATCAGCTGAG CGATGAGTTG GAGAAATTCC TCCACGATAC TTCCGTCGTG GGTGCGTCGG CGTGGAACAA GCTCTTCGAC GAGCAGATCG CGGGCCTGAC CTTCGATGTG GACGGAGAGA GCCTGGGCAT TGAGGCCACG CTGAACCTGA TGACCGACAG TGACCGCGCG CGGCGCGAGG CCGGTGCAAA AGCGCTGGCT GAAAAGTTCG AAGACACCGC GCCGCTGTTT GCGCGGGTGC ACAACACGCT GGCGAAGGAA AAAGAGATCG GCGACCGGTG GCGGGGTCTG CCCTCACCGC AGGCGGGCCG TCACCTCGCC AACCATGTGG AGCCCGAGGT GGTGGAGGCC CTGCGCAACG CCGTCGTGAA GGCCTACCCT CGCCTGTCCC ACCGCTACTA CAAGCTGAAG GCCAAATGGA TGGGCCTTGA AAAGATGGAG GTCTGGGACC GCAACGCACC CCTGCCGATG TCCGAGGACC GGATCGTCGG CTGGGACGAG GCGCGCCGCG TCGTGTCGGA GGCCTATGCG GGCTTTGATC CACGCATGGC AGAATTGGCA GAGCCGTTCT TCACCGACGG CTGGATCGAT GCGGGCGTGA AGGAAGGCAA AGCGCCCGGG GCCTTCGCCC ACCCGACCGT CACGGATGTG CACCCCTATG TGATGCTCAA CTACCTCGGC AAACCGCGCG ACGTGATGAC GTTGGCGCAC GAATTGGGCC ACGGCGTCCA TCAACGCCTG GCCGCGGCGC AGGGCGAGAT GTTGTCCTCT ACGCCTCTGA CACTGGCCGA GACCGCCAGC GTGTTCGGCG AAATGCTAAC CTTCCGCAAG ATGCTGTCGG AAGCCAAGGA CGACGCCACC CGCAAGGTCA TGCTGGCCGG TAAGGTGGAG GATATGATCA ACACTGTCGT GCGCCAGATC GCCTTCTATG ATTTCGAATG CAAGCTGCAC GATGCGCGAC GTGGCGGAGA GCTGACGGTC GACGACATAA ACGCCCTTTG GATGTCGGTG CAGGGCGAAA GCCTCGGGCC CGTGTTCAAT TTCATGGACG GGTATGAGAC CTTCTGGGCC TATATCCCCC ACTTCGTCCA TTCGCCCTTC TACGTCTATG CCTACGCCTT TGGCGACGGC CTCGTGAACG CCTTGTACGC GGTCTATGCG GAGGGCAACG AGGGCTTCGA GGAAAAGTAT TTCGACATGC TGCGCGCGGG CGGATCGAAG CACCACAAGG AACTTCTCGC TCCCTTTGGG CTGGACGCCT CGGACCCTGC ATTCTGGGAC AAGGGCCTGA GCATGATCGA GGGCTTCATT GATGAGCTGG AAGCGATGGA GTGA
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Protein sequence | MRLTYPAPLR DAAAETGGAP LEGLPVWDLS DLYEGQDAAS LKRDLDWLEE ACQSFAADYE GKLADLDADG LLDCTLRYEK IDMIAGRIMS FAGLRYYQKT TDGERAKFMS DMQDKITTYT TPLVFFSLEF NRIEDAQYDA MMDKNADLAR YKPVFDRMRA MKPYQLSDEL EKFLHDTSVV GASAWNKLFD EQIAGLTFDV DGESLGIEAT LNLMTDSDRA RREAGAKALA EKFEDTAPLF ARVHNTLAKE KEIGDRWRGL PSPQAGRHLA NHVEPEVVEA LRNAVVKAYP RLSHRYYKLK AKWMGLEKME VWDRNAPLPM SEDRIVGWDE ARRVVSEAYA GFDPRMAELA EPFFTDGWID AGVKEGKAPG AFAHPTVTDV HPYVMLNYLG KPRDVMTLAH ELGHGVHQRL AAAQGEMLSS TPLTLAETAS VFGEMLTFRK MLSEAKDDAT RKVMLAGKVE DMINTVVRQI AFYDFECKLH DARRGGELTV DDINALWMSV QGESLGPVFN FMDGYETFWA YIPHFVHSPF YVYAYAFGDG LVNALYAVYA EGNEGFEEKY FDMLRAGGSK HHKELLAPFG LDASDPAFWD KGLSMIEGFI DELEAME
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