Gene Jann_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3389 
Symbol 
ID3935862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3441668 
End bp3442375 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID637905762 
Productheat shock protein DnaJ-like 
Protein accessionYP_511331 
Protein GI89055880 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTTT GGACTCGCAT CTCAGAGGCG CTGGAAGCGC TGCGCCAGGG CGAAAGCCTG 
TCGGAGGTTT TCGGCCGTCT ACGCACGCCG CCGGAGCGGA CGGTGGCCTT CACGATTGCG
GTTATTGCGC TGTCGGCCAA GATGGCCAAA GCCGATGGCC TCGTGACCCG CGATGAGGTG
ACAGCCTTCC GCCGCGTGTT CCATATTCCC CCCGCCGATG AACCTGCCGC CGCGCGGGTC
TTCAACATGG CGCGGGAGGA TGTCGCGGGG TTCGAGCAAT ACGCCGACCG CATCGCGCGG
ATGTTCCGCG TCGATGGCAA ACCCTGCGGG GCCGACAGCG TGCTGTGCGA TTTGATGGAA
GGGCTCTTCC ACATTGCCAC GGCGGATGGC GAATATCACC CGGCAGAAGA TGCCTTCCTG
ACCCGTGTGG CCGAGATCTT CGGGATGGAG GAGGCCGCCT TCCACCTTCT GCGCGCCCGC
TACGCGCCCG ATCATGCGCC TGACCCCTAC GGCGTTCTGG GTGTTTCACC GGATGCGCCG
CTGGACGAGG TGCGCGCCAG TTACCGCGCG CAGGTGCGCC AGACACATCC CGACCAGATG
GTCGCGCGCG GCGTGCCGGA AGAGGCCATC AAGATCGCCG AGCAGCGGAT GCAGGCGATC
AACCGCGCCT GGGAGGAGAT CCAGAACCGT CGCCGGGAAC CCGCCTGA
 
Protein sequence
MSLWTRISEA LEALRQGESL SEVFGRLRTP PERTVAFTIA VIALSAKMAK ADGLVTRDEV 
TAFRRVFHIP PADEPAAARV FNMAREDVAG FEQYADRIAR MFRVDGKPCG ADSVLCDLME
GLFHIATADG EYHPAEDAFL TRVAEIFGME EAAFHLLRAR YAPDHAPDPY GVLGVSPDAP
LDEVRASYRA QVRQTHPDQM VARGVPEEAI KIAEQRMQAI NRAWEEIQNR RREPA