| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3383 |
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| Symbol | |
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| ID | 3935856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3436265 |
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| End bp | 3438046 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905756 |
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| Product | TrkA-like |
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| Protein accession | YP_511325 |
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| Protein GI | 89055874 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCC TTCCCCTATC GGACACCGGA GAGGGCCTTG CCACCCTCGG GATCCTCCTG
GTCATGTTCG CCCTGTTTTT GTGGGAGCGG TGGCCAACGG AAGTCGTGGC CATTGGCGGC
TGTGCCGTTC TGCTGATCCT GGGCCTTCTC CCCTACGAGC GCGCGGTGGG CGTGCTGTCG
AACCCCGCGC CCTGGACCAT TGCCGCAATG TTCATCGTCA TGGGGGCGCT GGTGCGCACG
GGCTCCCTCG ACCGGCTGAC CAAATTCGCC GAAGCCAATG CCAAGGCGCG GCCCGCGGTC
GCCGTGGCAA GCCTTCTGGC CTTTGTCGCC GTCGGCTCTG CCTTCATGAA CAACACACCG
ATCGTGGTGA TCATGATCCC GGTCTTTGTC CAGATCTCAA AGATCCTCGG GCAAGCACCG
TCGAAATTCC TGATCCCACT GTCCTATGCC GCGATCATGG GCGGCACGCT GACACTGATC
GGCACGTCCA CGAACCTGCT GGTCGATGGT GTGGCCCGGG CGCAGGGGCT GGAGCCGTTC
ACGATCTTCG AGGTGACGCC CATCGGTCTT GTCGTGGTTG CCTGGGGGAT GATCTACCTG
ATGGTGATCG GGCGGTTCCT GCTGCCAGAG CGGTCGTCGA TGGCGTCGCT GCTGGGTGGC
AGCCGGGCAC GGACGAAGTT CTTCACCGAG GTTGCTGTGC CCGAAGGCTC GTCCCTGATC
GGCCAAGCCG CGCGCGAGGT GGACCTGTTC AAACGCGACG GCGTGCGCCT GATCGACGTT
TTGCGTGGCG ATGCGTCCCT GCGGCGGGAC ATGGCGGGGG TGGAGCTGCG CGAAGGTGAC
CGGGTCGTGT TGCGCACCGA CATGGCCGAG GTGCTGGGGC TTCAGGCCTC CAAAGAGTTG
AAGACGGTCG ATAAACTCAG CCAGATCGCC ACGGAAACGG TGGAGGTTCT GATCACCCCG
GGTTGCAAGA TGATCGGGCG TTCCCTTGGC AATTTGCGGT TGCGCAGGCG GTATGGCGTT
TATCCGCTGG CGGTCCATCG CCGGAACCAG AACATCGGCA TGCAGCTTGA CGATCTGGTC
GTGCGCGTCG GCGATACCCT GCTGTTGGAA GGGGATCCGG CAGACATTTC GCGACTGGCG
GCCGACATGG ATCTGGTCAA CGTCTCCCAC CCGTCGGAAC GGGCATACCG GCGCGCAAAA
AGCCCGATTG CGATTGCGGC GATGGCCGGG ATCGTGGTCT TCGCCGCCTT CAACGTCGCC
CCGATCCTGG CGCTGGCCGT CGTGGCTGTG GCGGTGGTCC TGCTGACCGG TTGCATCGAC
GCGGAGGAAG CGTTTTCGTT TATCGAGGGC CGCTTGCTGG CGCTGATCTT TGCCATGCTC
GCCGTGGGGG CCGCATTGGA CCACACCGGC GGGATCAGTC TGATCGTAGG TGCCATGGCC
CCGTGGCTGG AGGGGGCGCC GACCTGGGTG TTACTCTTTG CGGTCTACTA CATCACCACG
GTGCTGACAG AGCTGGTCTC AAACAACGCG ATTGCGGTGA TCATGGCCCC CATCGCGATT
GCGCTTGCGC AGGCCACGGG CGTCGACCCC AGACCCCTTG TCATCGCCGT GATGATCGCG
GCCTCTGCCT GTTTTGCAAC GCCCATCGGG TATCAGACCA ACATGTTGGT CTATGGGCCG
GGTGGATATG CGTTCACGGA TTTCTTGAAG GTCGGCGTAC CCCTGAACCT GTCGCTTGGC
GTCGTCGTTT GCCTTACCAT CCCATTGATC TGGCCCCTGT GA
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| Protein sequence | MLTLPLSDTG EGLATLGILL VMFALFLWER WPTEVVAIGG CAVLLILGLL PYERAVGVLS
NPAPWTIAAM FIVMGALVRT GSLDRLTKFA EANAKARPAV AVASLLAFVA VGSAFMNNTP
IVVIMIPVFV QISKILGQAP SKFLIPLSYA AIMGGTLTLI GTSTNLLVDG VARAQGLEPF
TIFEVTPIGL VVVAWGMIYL MVIGRFLLPE RSSMASLLGG SRARTKFFTE VAVPEGSSLI
GQAAREVDLF KRDGVRLIDV LRGDASLRRD MAGVELREGD RVVLRTDMAE VLGLQASKEL
KTVDKLSQIA TETVEVLITP GCKMIGRSLG NLRLRRRYGV YPLAVHRRNQ NIGMQLDDLV
VRVGDTLLLE GDPADISRLA ADMDLVNVSH PSERAYRRAK SPIAIAAMAG IVVFAAFNVA
PILALAVVAV AVVLLTGCID AEEAFSFIEG RLLALIFAML AVGAALDHTG GISLIVGAMA
PWLEGAPTWV LLFAVYYITT VLTELVSNNA IAVIMAPIAI ALAQATGVDP RPLVIAVMIA
ASACFATPIG YQTNMLVYGP GGYAFTDFLK VGVPLNLSLG VVVCLTIPLI WPL
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