| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3376 |
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| Symbol | |
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| ID | 3935849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3429381 |
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| End bp | 3430790 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905749 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_511318 |
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| Protein GI | 89055867 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.307758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCC AGAAGCTCTA TGTCGGCGCG AAGCTGCGCT CCATCCGCAC GGGCGTGGGT
CTGACCCAGA AGGATTTCGC GGCAAAGCTC GGGATCTCCC TGCCCTACCT CAACCAGATG
GAGAACAATA ACAGGCCGCT CTCGACCGCC GTTCTGATGG GTCTGGCGCA GGATTTCGGG
GTTGATGTCA CGGAATTGTC GGCCTCGGAT GCCGACCGCA TCGTCTCGGA TATGCGGGAG
GCGTTGGCCG ATCCGCTGTT TGCCGAAGTC GCCCCGGCCC TTGCAGATCT GCGGCTGGTT
GCCTCCAACG CGCCCACCCT CGCCCGCGCC TTCCTGGAGC TGCACCGCGC CTACCGTCAG
ACCCATGAAC GCCTGGCCTC CCTCGACGAG GCCTTGGGCC ACCAAAGCAG CGCCGCCCCC
TCCCCCTGGG AGGAGGTGCG TGATTTCTTC CACTACACCG ACAATTACAT CGACGCCGTG
GACCGCGCGG CGGAGCGGTT CGCCACCCGC GCCCAAAAAA CCGGAAGTGG CGGCGATCTG
GCCGCCCACA CCCGGGCCGT GCTGTCGGAC ATGGGCGTCA CGATCCGGCA TGCCTCCGGC
GACGGCGTGC GCAGTTATGC GCCGGACACA CGGGTCCTCA CCCTCTCCCC CCAGGCCGCG
CCGGAAACGC AGCGGTTTCA ACTGCTGCAC CAATACGCGC TGTTGGGTCA GGAAAAACTG
ATCGAGGCGA CGTTGGATCT GGCCCGGTTT CAATCCGACA CGGCCCGGGA AATCGCCCGG
ATCGGCATGG CCAACTACTT CGCGGGCGCC GTCCTGATGC CCTATGCCCG CTTTGCCGAG
GCCGCCGTTG AGACCCGCCA TGATCTGGAG CGTCTGGCAA TCACCTTTGG CGCTTCGATT
GAACAGATCG CCCATCGTCT GTCGACCCTG CAACGTCCCG GGGCCAAGGG GATCCCGTTC
TTTTTCGCGC GCGTGGATCA GGCGGGCACC GTCACCAAAC GCCACTCGGC CACGCGGTTG
CAATTTGCCC GCTTCGGCGG CGCGTGCCCG CTCTGGAACG TGCATCAGGC CTTCGAGACA
CCGGGTCATT TCCTGCGGCA ACTGGCCGAG ACGCCGGACG GGGCGCGCTA CGTGATCCTG
GCGCGCGACG TGTCGAAATC CGGCGGGGCC TGGGGTCGTC CGACCCGGCG CTACGCGGTG
TCGCTGGGGT GCGAGGTGCG CCACGCGGCC TCTCTCGTTT ACGCCGACGG TCTGGATCTG
GAGCGGGACA CGGCGTTTCA GCCCATCGGC ATTTCCTGCC GGATCTGCGA ACGCCCCAAT
TGCCATCAGC GCGCCGTCCC GCCGCTGGAG CGTCAACTGG TCGTCGACCC GAACCGACGC
GGCACCCTGC CCTATGAGGT TGCGCAATAG
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| Protein sequence | MPTQKLYVGA KLRSIRTGVG LTQKDFAAKL GISLPYLNQM ENNNRPLSTA VLMGLAQDFG
VDVTELSASD ADRIVSDMRE ALADPLFAEV APALADLRLV ASNAPTLARA FLELHRAYRQ
THERLASLDE ALGHQSSAAP SPWEEVRDFF HYTDNYIDAV DRAAERFATR AQKTGSGGDL
AAHTRAVLSD MGVTIRHASG DGVRSYAPDT RVLTLSPQAA PETQRFQLLH QYALLGQEKL
IEATLDLARF QSDTAREIAR IGMANYFAGA VLMPYARFAE AAVETRHDLE RLAITFGASI
EQIAHRLSTL QRPGAKGIPF FFARVDQAGT VTKRHSATRL QFARFGGACP LWNVHQAFET
PGHFLRQLAE TPDGARYVIL ARDVSKSGGA WGRPTRRYAV SLGCEVRHAA SLVYADGLDL
ERDTAFQPIG ISCRICERPN CHQRAVPPLE RQLVVDPNRR GTLPYEVAQ
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