| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3375 |
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| Symbol | |
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| ID | 3935848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3428006 |
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| End bp | 3429223 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905748 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_511317 |
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| Protein GI | 89055866 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0699824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGG CTTCCCCGGC GCGGTTTCTG GATCGCACCA CACCCCCGCA TATCTTCACC
TTGATCCTCG TCACAGGCCT TGGCGCGCTG TCGATGAACA TCTTCCTGCC GTCTCTGCCG
GCGATGGCGG ATTATTTTGA CACCGATTAC CGCCTGATGC AGCTGTCGGT GTCGCTCTAT
CTCTTCGTCA ATGCCGGGCT TCAGGTGATC ATCGGGCCGA TCTCGGATCG CTACGGGCGC
AGACCCGTCA TTCTCGGCGG CTGCGCGATC TTCCTTCTCG CAACCCTCGG GTGCCTTCTG
GCCAACACCA TCGAGGTCTT CCTCGTCTTC CGCATGGTCC AGGCCGTCAT CGTCACGGGC
CTCGTTCTGG GCCGGGCGGT CGTGCGCGAC ATGTATGACG ACCGGGAAGC CGCGTCGCAG
ATCGGCTACG TCACCATGGG CATGGCCGTG GTCCCGATGA TCGGCCCCGG CATCGGCGGC
GTCTTGGAAG AGAGTTTCAG CTGGCACGCC AATTTCGTCC TCCTCTTCAT CCTCGGGGCC
GCGATCATGG CACTGGTCTG GGCCGACCTC GGCGAAACGG CACGCACCCA AAGCACCAGC
CTCCGCGCAC AGATCCGGGA ATATCCCGAA CTTCTCGCCT CCCGCCGCTT CTGGGGCTAT
TGCCTGACAG CCTCCTTCGC GTCGGGCGCG TTCTTCTCCT ATCTCGGCGG GGCACCCTAT
GTGGGGTCCG AGGTCTTCGG TCTGTCGGCG GCCAAGGTCG GCCTCTACTT CGGCGCGCCG
GCCCTCGGCT ACTTCTTTGG CAATTGGATA TCGGGGCGAT ACTCCATGCG TGTCGGCATC
AATGGGATGA TCCTGTGGGG CTCCATTGCG TCGGCCATCG GGATGGGGCT GTCCCTTGGC
CTGTCACTCC TTGGCTGGCA AACCGCGATC ACCTTCTTCG GGTTCATGAC CTCCGTGGGT
CTGGGCAACG GGATGGTCCT GCCGAACGCG ACCTCGGGTA TGCTATCGGT GCGCCCGCAT
CTGGCGGGCA GCGCGTCGGG CCTTGGCGGC GCAATCATGC TGGCAGGCGG TGGCGCGATG
TCCCTTCTGG CCGCAGCGGT CCTGACCGGC GACCGGGGGG AATTGCCGCT TCTGGTGATC
ATGTTTGCCA CAGCCATCGC AGCGGTCGTG GCGATTGGCT ATACGATCCG CAGAGAGGCG
ACGCTCACCT CCGATTGA
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| Protein sequence | MMTASPARFL DRTTPPHIFT LILVTGLGAL SMNIFLPSLP AMADYFDTDY RLMQLSVSLY
LFVNAGLQVI IGPISDRYGR RPVILGGCAI FLLATLGCLL ANTIEVFLVF RMVQAVIVTG
LVLGRAVVRD MYDDREAASQ IGYVTMGMAV VPMIGPGIGG VLEESFSWHA NFVLLFILGA
AIMALVWADL GETARTQSTS LRAQIREYPE LLASRRFWGY CLTASFASGA FFSYLGGAPY
VGSEVFGLSA AKVGLYFGAP ALGYFFGNWI SGRYSMRVGI NGMILWGSIA SAIGMGLSLG
LSLLGWQTAI TFFGFMTSVG LGNGMVLPNA TSGMLSVRPH LAGSASGLGG AIMLAGGGAM
SLLAAAVLTG DRGELPLLVI MFATAIAAVV AIGYTIRREA TLTSD
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