| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3355 |
|---|
| Symbol | |
|---|
| ID | 3935828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 3407228 |
|---|
| End bp | 3407482 |
|---|
| Gene Length | 255 bp |
|---|
| Protein Length | 84 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637905728 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_511297 |
|---|
| Protein GI | 89055846 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.595371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGCGC CCTGCCTGAT CAACGAATTC CACGATCCAC GACGCGATTT CCACCAGGTA
GACGTGTATT TCCGGGTGAC CCTGGTCTCG GGCGATCCGT TGCAGGACTG GACGGATCCT
GAAGGGATCG TGACCCAGCG ACGCCTTGTG GCACGGGAGG AGATGGCCTC GATCCGGGTG
AAACCCGACA GTCTGGAACG CATCGCCTGG GACGGCGGCA TCTTCTATGA CGTGCTGGAG
CCGACGTTAC GCTGA
|
|---|
| Protein sequence | MGAPCLINEF HDPRRDFHQV DVYFRVTLVS GDPLQDWTDP EGIVTQRRLV AREEMASIRV
KPDSLERIAW DGGIFYDVLE PTLR
|
|---|
| |