| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3348 |
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| Symbol | |
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| ID | 3935821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3401331 |
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| End bp | 3403211 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905721 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_511290 |
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| Protein GI | 89055839 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.26431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACT TCCTCCTCCT TTCCTTCATC TTCCTGATCG CGGGCGTGAT TGCGGTGCCG
ATTGCCAGCC GTCTGGGATT GGGGTCGGTG CTGGGATACC TGATCGCGGG GATCGTGATA
TCGCCGGTGC TGCGCGTTCT GGGGGTCGAC GTGATCTCCA TCCAACATTT CGCGGAATTC
GGCGTGGTGA TGATGCTGTT TCTGGTGGGG TTGGAGCTGC AACCCAAAGC ACTGTGGGAA
ATGCGCGCGC GGTTGATCGG GCTTGGCGGC GGGCAGGTCG TGCTGACGAT ACTTGCGGTC
CTGGGCGTGG CGATTGCGCT GGGGCAAAGC TGGCAAATCG GGCTGGCCGT GGGTTTCATT
TTCGCGCTGT CATCGACGGC GATCGTGCTG CAAACCCTTG GCGAAAAAGG CCTTCTGAGG
TCCGACGGTG GGCAGGGCAG CTTTTCGGTC CTGCTGACCC AAGACATTGC GGTGATCCCG
ATGCTGGCAA TCTTGCCGCT TCTGGCCATG GCGCCGGATA TGGCGCCGGA CTTGGCTGAC
ATGGGGGCGG ATGCCAGCCA TGGGGCGGCA GGTCACGACA GTGCTGACGC GTCGCACGGC
GCGCAGGAGC ATGCCGGTGA CGGCCACGGT GACGCGATGA GCCTCGTCTC CGGCCTGAAT
GGATGGCAAA CCGCGCTGGT GACACTCGGC GCGGTGGGCT TTGTGGTTGT CGGTGGATCG
CTCCTGACGG GGCCGCTGTT CCGCTTCATC GCCGCGGCCA ACCTGCGCGA ATTGTTCACG
GCCACCGCGC TGATGATGGT GATCGGCATC GCACTTCTGA TGTCGCTTGT GGGCCTCTCC
CCTGCCCTTG GAACGTTCCT TGCGGGCGTC GTTCTGGCAA ATTCCGCCTA CCGGCACGAG
TTGGAATCGG ACATTGACCC CTTTCGCGGC CTCCTTCTGG GCCTCTTTTT CATGACCGTG
GGCGCGGGCG TGAACTTCAC GCTTCTGGGG GAGAACCTCG GCACGGTTCT GGGTTTGACG
CTTGGCTTGA TGGTTCTGAA AGCGGTGGTC CTCATCGCGC TCGCCTATGT GTTCCGGATC
AAGGGCGCGG ACAAATGGTT GATGGCGCTG AGCCTGGCGC AGGCCGGTGA GTTCGGCTTC
GTCCTGTTGT CCTTCACGGT GGCTAACAAC GTCTTGCCTG CCGCCCTGTC AGATCTGCTT
TTGCTGGTCG TGGCCCTGTC GATGTTGCTG ACGCCCGCGC TTTTCATCCT GTATGACCGG
GTCATCGCAC CCCGCTATGC TGCAGGCGAG GCACGGGAGG CGGATGCCAT GCCCGACGAG
GCGAAGATCA TCATCGCAGG CGCAGGCCGG GTGGGTGGGC TGATCGACCG GGTTCTGCGC
GGGGCGGGTC ACGAGACGAC GGTGATTGAC TATAACTCGC GCCGCCTGGA TATCATGGCG
AAATTCGGGG TGAAGAACTA CTTCGGCGAC GCCACGCGCC CCGACCTTCT GGCCGCCGCC
GGTCTCGCCG AAGCCAGCGT GCTGATCGTC GCGATAGACG ACCGCGACAG CATCACCCAG
ATCGTGGATT ACGCCCACAA GACATATCCC AACCTGCACG TCATTGCCCG GGCGACAGAC
CGCGATCACG TCTATGACCT GTGGTTCCAC GGCTGCCGGG ACATCATCCG GGAGACCTAC
GACAGCACCC TGCGCATGGG TCGCTCGGCG TTTGAGGCAT TGGGTATTGA GGCCGAGACC
GCCCAGGAGA TGGTTGATGC GTTCAACGCC CATGACCGTG AGATCATGTT GGCCATTGCA
TCGGTCCACA AGGTGGGCGT GGCCCCCCAT GAGAACCCCG GATTATGTAG CGAAAGTGGC
AGAGCTGCGC GACGATTTTG A
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| Protein sequence | MTDFLLLSFI FLIAGVIAVP IASRLGLGSV LGYLIAGIVI SPVLRVLGVD VISIQHFAEF
GVVMMLFLVG LELQPKALWE MRARLIGLGG GQVVLTILAV LGVAIALGQS WQIGLAVGFI
FALSSTAIVL QTLGEKGLLR SDGGQGSFSV LLTQDIAVIP MLAILPLLAM APDMAPDLAD
MGADASHGAA GHDSADASHG AQEHAGDGHG DAMSLVSGLN GWQTALVTLG AVGFVVVGGS
LLTGPLFRFI AAANLRELFT ATALMMVIGI ALLMSLVGLS PALGTFLAGV VLANSAYRHE
LESDIDPFRG LLLGLFFMTV GAGVNFTLLG ENLGTVLGLT LGLMVLKAVV LIALAYVFRI
KGADKWLMAL SLAQAGEFGF VLLSFTVANN VLPAALSDLL LLVVALSMLL TPALFILYDR
VIAPRYAAGE AREADAMPDE AKIIIAGAGR VGGLIDRVLR GAGHETTVID YNSRRLDIMA
KFGVKNYFGD ATRPDLLAAA GLAEASVLIV AIDDRDSITQ IVDYAHKTYP NLHVIARATD
RDHVYDLWFH GCRDIIRETY DSTLRMGRSA FEALGIEAET AQEMVDAFNA HDREIMLAIA
SVHKVGVAPH ENPGLCSESG RAARRF
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