| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3334 |
|---|
| Symbol | |
|---|
| ID | 3935807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 3384045 |
|---|
| End bp | 3385160 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637905707 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_511276 |
|---|
| Protein GI | 89055825 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1565] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.47011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGGAA GAACCGTGTC GCTTAAGGCC CGCCTGCTGG CGCGGATCGC GCGGTTGGGG
CCGATATCGC TGGCCGATTA CATGGCCGAA TGCCTGCACG ACCCGCAATT TGGCTATTAC
GCCACCCGCG ATCCCCTGGG GCGGGGGGGC GATTTCATCA CCGCGCCCGA GATATCTCAG
ATGTTCGGAG AGCTGATCGG CCTATGGCTG GCGCAGGTCT GGATGGATCA GGGCGGCGGG
GCGGCCGCAC TGGTGGAGTT GGGCCCGGGG CGGGGCACGT TGATGGCCGA CGTGATGCGC
GCCACGCGCG GCGTGCCGGG CTTCCACGAC GCGGTCACGG TGCATCTGGT GGAGGCGTCC
CCGGTGTTGC GCGCCATGCA GACAGAGGCA TTGGCGGCAT ACGCGCCGAG GTTCCACGAC
AATCTGGCTG ACGTGCCGGA AGGGCCAATC CTGCTGGTGG CCAACGAGTT CTTCGACGCG
CTGCCGATCC GGCAATTCCA GATGAGCGAT GCAGGCGATT GGCAGGAGCG GCAGATTGGG
GCATCCGACG GCGCGCTGAT CTGGGGCCTC GCACCCCCGG CCCCGCTGGA TGTCCGTGAC
GGATTTGCGC CCGGTATGCC CGGCATGATC GTGGAGACCT GCGCCCCGGC AGAGGCGATT
GCCGCCGAGA TCGGGCGACG CGTGGCCCAG GGCGGCGCGG CGCTGATCGT GGATTACGGC
GATTGGCACA GCGCGGGCGA TACGTTTCAG GCGCTTGCCA AGCACGCCTA CACGGACCCG
TTGGACGCGC CGGGAGAGGC CGATTTGACC GCCCATGTGG CGTTTGCCCC CATCGCGCGC
GCGGCCCGGG CGGCGTCTGG CGTGGTCGCC TCGGGGCTGA CACGGCAGGG GATGTTCCTA
GAGCGGCTTG GCATCACGGC ACGGGCACAG GCGCTGGCGC GGGGCCTGGA CGGCACGGCG
CTTGACACCC ACATCGCCGC CCACCGCCGC TTGACGCATG GGGATGAAAT GGGAACTCTG
TTCAAGGTGC TGGCGCTGAC CCCGGAGGGC GCGCCGCCAC CGCCCGCCAT AGACCCAGCC
CCTGCCCCAT CCGCTGACCC GGAGCCCGCC CGATGA
|
|---|
| Protein sequence | MSGRTVSLKA RLLARIARLG PISLADYMAE CLHDPQFGYY ATRDPLGRGG DFITAPEISQ
MFGELIGLWL AQVWMDQGGG AAALVELGPG RGTLMADVMR ATRGVPGFHD AVTVHLVEAS
PVLRAMQTEA LAAYAPRFHD NLADVPEGPI LLVANEFFDA LPIRQFQMSD AGDWQERQIG
ASDGALIWGL APPAPLDVRD GFAPGMPGMI VETCAPAEAI AAEIGRRVAQ GGAALIVDYG
DWHSAGDTFQ ALAKHAYTDP LDAPGEADLT AHVAFAPIAR AARAASGVVA SGLTRQGMFL
ERLGITARAQ ALARGLDGTA LDTHIAAHRR LTHGDEMGTL FKVLALTPEG APPPPAIDPA
PAPSADPEPA R
|
|---|
| |