Gene Jann_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3330 
Symbol 
ID3935803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3381277 
End bp3381780 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content59% 
IMG OID637905703 
Producthypothetical protein 
Protein accessionYP_511272 
Protein GI89055821 
COG category[S] Function unknown 
COG ID[COG5465] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.635014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.855915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACG CAGAAGAATA TTTCGATATC GAAGAGCTGC ATCCAATCGA TATCGTGGAA 
ACGCTCGCCG CGCATCACGC GTGGGACTTC GATCGCATCG CTGACGACCA GATTGCCATG
GCGATCGACG GGCAGTGGCG CACCTACTCC ATCACGCTGG CCTGGTCCGC CTATGATGAA
ACGTTGCGGA TGATCTGCAC CTTCGACATG GAGCCGCCCG AGGGCACGAT GCCCAAGCTC
TACGAGATGC TCAATCTGGT GAATGATCGG TGTTGGGCCG GGGCCTTCAC CTATTGGGCC
TCGCAAAAGC TGATGGTGTA TCGCTATGGT CTGGTGCTGG CCGGAGAGCA ACTGGCCTCT
CCCGATCAGA TCGCCTGCAT GGTGGAAGCT GCCGTTATCG CGTCGGAGCG CTATTACCCG
GCGTTCCAAC TGGCGCTTTG GTCCGAGCAG ACGCCCGATC AGGCGATGTC GGTGGCGATC
TCTGAAGGCT ACGGACGGGC TTAG
 
Protein sequence
MSHAEEYFDI EELHPIDIVE TLAAHHAWDF DRIADDQIAM AIDGQWRTYS ITLAWSAYDE 
TLRMICTFDM EPPEGTMPKL YEMLNLVNDR CWAGAFTYWA SQKLMVYRYG LVLAGEQLAS
PDQIACMVEA AVIASERYYP AFQLALWSEQ TPDQAMSVAI SEGYGRA