Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3314 |
Symbol | |
ID | 3935787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3368271 |
End bp | 3369233 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637905687 |
Product | alpha/beta hydrolase |
Protein accession | YP_511256 |
Protein GI | 89055805 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0011221 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0691996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGATGA CCGCTGACAT CACCGAGCCC GCACCGTTCT ACGAGGCTGT CGCCGAGGGG CCGGCCAATG TCGCGGCCTC CTGGGTGCGG GCGGCAGATG GCACGCGCCT GCGCATGGCG GTCTGGCCCA CCCCAAATCA AGAAGGCGGG TCCAACGGCA CCGTACTGAT GTTTCCGGGC CGCACGGAAT ATGTCGAGAA ATATGGCCGC GTTGCCAGTG ATCTGGCAGA AAACGGCTAC GGCATGGTGG CGTTCGACTG GCGCGGTCAG GGTCTGGCGG ATCGCCCGCC GCATCGCCGC GACATGGGCC ATGTGCTCAC CTTCGATGAA TATAGACAGG ACGTGACGGC ATTCCTCAAG GCGATGGAGC CGATGAACCT GCCCAAGCCG TGGTTCCTGA TCGGCCATTC CATGGGCGGC TGCATCGGGT TGCGCGCGCT CTATGATGGT CTGGACGTGG AGGCTGCGAC CTTTACCGGC CCGATGTGGG GCCTGCAGAT GAGCAACCTC CTCCGCACGC TCCAGCCCGC GATCACCAAG CTCGCCGGGC CAATGGGCTT TGGCAAGACC TTCGCGCCCA CCACCGGCCC GTGGGAGCCG CTGGAATTCG AGGACAATTC CCTGACCACT GACCGCGACC AGTTTGACTA CATGTTCCGC CAGACCGATG TGCATCCGGA ACTGGCCCTG GGCGGCCCTT CGCTCAGCTG GGTCAAGGCC GCGCTTTGGG AAACGGAGGA TCTGATGGAG AAGACACCGC TCGACCTGCC CGCCCTGGCC ATCGTCGGCA CCGGAGAGCA GATCGTGGAC GTCGACGCCG CCAGGACCCG CATGGCCAGC TGGCCCAAAG GCAGCTACCT CAGCATCGAA GGCGGGCGCC ATGAGGTGTT GATGGAGGCG GATCCACTCC GTGACCAGTC CCTGGACGCC ATTCTCGCAC TATTCCGGAA AGCCGCGCGT TAA
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Protein sequence | MLMTADITEP APFYEAVAEG PANVAASWVR AADGTRLRMA VWPTPNQEGG SNGTVLMFPG RTEYVEKYGR VASDLAENGY GMVAFDWRGQ GLADRPPHRR DMGHVLTFDE YRQDVTAFLK AMEPMNLPKP WFLIGHSMGG CIGLRALYDG LDVEAATFTG PMWGLQMSNL LRTLQPAITK LAGPMGFGKT FAPTTGPWEP LEFEDNSLTT DRDQFDYMFR QTDVHPELAL GGPSLSWVKA ALWETEDLME KTPLDLPALA IVGTGEQIVD VDAARTRMAS WPKGSYLSIE GGRHEVLMEA DPLRDQSLDA ILALFRKAAR
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