| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3308 |
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| Symbol | |
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| ID | 3935781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3362689 |
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| End bp | 3363207 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905681 |
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| Product | CarD family transcriptional regulator |
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| Protein accession | YP_511250 |
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| Protein GI | 89055799 |
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| COG category | [K] Transcription |
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| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000178714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0560372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAG CCCGTAAAAC GCTCGACTTC AGCCCCAATG ATTACGTTGT CTACCCCGCC
CATGGCGTGG GTCAGATCAT CACGATCGAG GAGCAGGAAG TCGCGGGGCT AAACCTGGAG
CTGTTCGTGA TCTCGTTCGA GAAGGACAAG ATGACGCTGC GCGTTCCGAC CGCCAAGGCG
ACCGAAGTGG GCATGCGTCC GCTGAGTGAT CCGACGGTTG TGTCCAAGGC GCTGGACACG
CTGAAAGGCA AGGCGCGCGT GAAGCGGGCG ATGTGGTCGC GCCGCGCACA GGAATATGAG
CAAAAGATCA ACTCAGGTGA TCTGATCTCC ATCGCAGAGG TCGTGCGCGA CCTGCACCGC
GCCGACGATC AGCGGGAACA GAGCTATTCG GAACGGCAGC TGTATGAAGC CGCTCTGGAG
CGTCTGACCC GCGAATTGGC CGTCGTCAAA GGCATCGACG AGGCGGGTGC CGGCGCACAA
TTGGTCGACG TTCTGTCCAA GCGCGTGGCC GCCGCCTAA
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| Protein sequence | MTKARKTLDF SPNDYVVYPA HGVGQIITIE EQEVAGLNLE LFVISFEKDK MTLRVPTAKA
TEVGMRPLSD PTVVSKALDT LKGKARVKRA MWSRRAQEYE QKINSGDLIS IAEVVRDLHR
ADDQREQSYS ERQLYEAALE RLTRELAVVK GIDEAGAGAQ LVDVLSKRVA AA
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