Gene Jann_3306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3306 
Symbol 
ID3935779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3361434 
End bp3362255 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID637905679 
Productcobalamin-5'-phosphate synthase 
Protein accessionYP_511248 
Protein GI89055797 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000293858 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.059508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGGA TTACGTCGCG TGCGCCCTGC GGCAGAAAGG TCTTTTTCAT GCCTGAAACC 
GACACCACCC CATCGCGGCC GCGCCCACAG CTTCGCGACC TGATCCGCGC GGTTCATTTG
CTGACCCGCC TGCCCCTGCC CGGCGGCGAC GCAACCCGTG GGGCCGCCGC AGCCTGGGCC
TGGCCCCTGG TGGGCCTGAT CGTCGGTCTG GGACAGGTGG CGGCTGGCCT TTTGGCCCTG
TGGCTTGGCG TGTCGGAAGC TGTGGCCGCA GGGGTGGCGA TTGCGGCGGG GCTGTTGATC
ACCGGCGGAT TGCATGAGGA TGGACTGGCC GATTGCGCCG ACGGGTTCTG GGGCGGAATG
ACCCCCGCGC GCCGGTTGGA AATCCTGAAA GACAGCCGCA TCGGCGCCTA CGGCGTCCTT
GCGTTGATCG TGACCATCGG CTTTCGGTGG GCCTTGTTCG CGTCCCTCCT CGCAATCGCT
CCGCTCACGC TCCTCGCAGC CGCGATGATC AGCCGGGCGG GGATCGCGGT GGTGATGGCG
CGCCTGCCTT TTGCGCGTGA GGGTGGCTTG GCCGCGCATG TGGGGCGCCC TCCGGCCTGG
GCGGTCGGTC TGGGCGGTAT CATTGCGGGA TTGGGGGCTA TCGTGTTTGC CGGGATCGGC
GCGGGGCTCG CGGCGCTGGG TGTCGCAACC GTCGCGATCC TGATCGTCGC CGCCCTCGCA
CGCGCCAAAA TTGGCGGGCA AACCGGGGAC GTTCTGGGTG CGACGCAGGT GGTGGCAGAG
CTTGCTGCGC TGGCCACCTG CGCCGCGTTT TTATCTACTT AG
 
Protein sequence
MYRITSRAPC GRKVFFMPET DTTPSRPRPQ LRDLIRAVHL LTRLPLPGGD ATRGAAAAWA 
WPLVGLIVGL GQVAAGLLAL WLGVSEAVAA GVAIAAGLLI TGGLHEDGLA DCADGFWGGM
TPARRLEILK DSRIGAYGVL ALIVTIGFRW ALFASLLAIA PLTLLAAAMI SRAGIAVVMA
RLPFAREGGL AAHVGRPPAW AVGLGGIIAG LGAIVFAGIG AGLAALGVAT VAILIVAALA
RAKIGGQTGD VLGATQVVAE LAALATCAAF LST