| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3305 |
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| Symbol | cobT |
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| ID | 3935778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3360370 |
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| End bp | 3361383 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637905678 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_511247 |
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| Protein GI | 89055796 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00236364 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.102237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAC CCACCACCCT CGTAGAGTTC CAAACAGCGC TTGCCGCTGC CACCGGCCCC
GATGACGCGG CCCGCGCCGG TGCGGCAGAG CGCAATGGCC AGCTGACCAA GCCCCCGGGG
GCCTTGGGGC TACTGGAGGA TCTGGCGATC TGGTACGCGG GCTGGCGTGG CGATGCGCGG
CCCCGGATCA CCGCGCCGCA GGTGCTGGTT TTCGCGGGAA ATCATGGGGT TGCAGCGCGC
GGCGTCAGCG CGTTCCCGCC GGAGGTGACG GTGCAGATGG TCGCCAATTT CGCCCATGGC
GGCGCGGCGA TCAACCAGCT GAGTGACCTG GCGGGGGCCA CGATGTCGGT CCACCCGATT
GACCTTGAGA CGCCGACCGC CGATTTCACC CAAGGCCCCG CCATGTCCGA GGCCGGGGTC
ATGGCCGCCA TCGCGGTCGG GTGGGAGGCC GTGGACACCG ACGCGGACCT GCTCGTCGTG
GGGGAAATGG GCATCGGCAA CACGACCTCT GCGGCTGCGG TGGCCAACGC ACTTTACGGT
GGCGCGCCCG AGGATTGGAC CGGACGGGGC ACGGGCGTGG ATGAGGCAGG CATCGCGCTG
AAATCCAGAA TTGTGGCCGA GGGGCTTGCG GTCAACCCGG AGGCGGCGAC CGACCCGCTG
CAAGCGCTCC GGTGCCTCGG CGGGCGGGAG CTTGCCGCCA TGGCCGGGGC GATCGCCCAT
GCCCGCATCC TGCACATCCC GGTGATCCTG GACGGGTTCA TCTGCACCGC CGCCGCCGCC
GTGCTGGAAT GTGCCGTCAG TGGCGCGCTG GACCACGCAA TCGCCGGTCA CGGTTCCGCC
GAGCAAGCCC ATGCCCGGAT GTTGCACCAT CTGGGCAAGA CGCCGCTTCT CCAACTGGGG
CTGCGGTTGG GCGAAGGCTC GGGCGGGGCG CTTGCGATCC AGATCCTACG CGGCGCGATT
GCCTGCCATT CCGGCATGGC GACCTTCGCG GAGGCGGGCG TGGCGGGCGG CTAG
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| Protein sequence | MTTPTTLVEF QTALAAATGP DDAARAGAAE RNGQLTKPPG ALGLLEDLAI WYAGWRGDAR
PRITAPQVLV FAGNHGVAAR GVSAFPPEVT VQMVANFAHG GAAINQLSDL AGATMSVHPI
DLETPTADFT QGPAMSEAGV MAAIAVGWEA VDTDADLLVV GEMGIGNTTS AAAVANALYG
GAPEDWTGRG TGVDEAGIAL KSRIVAEGLA VNPEAATDPL QALRCLGGRE LAAMAGAIAH
ARILHIPVIL DGFICTAAAA VLECAVSGAL DHAIAGHGSA EQAHARMLHH LGKTPLLQLG
LRLGEGSGGA LAIQILRGAI ACHSGMATFA EAGVAGG
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