| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3298 |
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| Symbol | |
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| ID | 3935771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3351933 |
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| End bp | 3352982 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905671 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511240 |
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| Protein GI | 89055789 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.877602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.186988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGA CCTCATCCGA TATCCAAATC TCCCACGCGC CGCGCAACCA GTGGTGGGAT
GTCTGGGACC AGTTCCGCAC CCACAAGGGC GCGCTCTTCG GGTTGGCATT CTTCGTCTTC
TCGCTGATGT TCGTCTATCT GGGGCCGCTG TTCTGGACAC TCGACAGTCA GTATATCGAC
ATCCGGGCGC GCAACACGAA CCACATCCTC GCCTGCCTGG GCGTGGGCGG CGGCTGGTTC
TCCCCCGAAG GATGGGCGGC GTGGTTCCGC GATATGCCCG CCTGTTTCGC CTCACCCGAG
GAGTTCGGTC GCGCCAATCC GATCTATGCG CTGAAGGTGT CCTGGGCACA CCCCCTTGGC
GCGGACCAAC TGGGCCGCGA TACGCTGTCG CGCATGATGG TCGGGGGGCA AACCTCCATC
GCCGTCGGCC TGACCGCGAT GCTTCTGGCG CTGTTTTTCG GCACGCTGAT CGGCGTCGTG
GCGGGCTATT TCAAACGGGT CGACGGGTTG CTGATGCGCT TCACGGATCT GTTTCTCGCC
ATGCCCCTTC TGCCGCTGCT GCTGGTGATC ATCATGCTGT TCCGTGACAC TCTGCGGAAC
GCGTTTGGCC CCGAGGGCGG GATCTTCGTG CTGATCGTGG TGGTCATTGG CCTGACGTCC
TGGATGCAGA CCGCGCGCGT GGTGCGCGGC GATGTGCTGG CCCTGAAAGA GCGGGAGTTC
GTTCTGGCCG CACGCTCCAT TGGCACACCA CCCTGGCGGT TGATCCTGCG CCATGTGCTG
CCCAACGTGA TGTCGTCGAT CATGGTGTCC GCCACGCTCG GGATCGCCAA CGCGATCATC
ACCGAGTCCG CCCTGTCCTT TCTGGGCCTG GGCTTCCCGT CGGACTTCCC CACCTGGGGC
CGGTTGCTGT TTGATGCCAC CGATTGGCTG AGCCAGAACC CCGAGCGGGT GATCTGGCCG
GGCCTGTTCA TCTCGCTGAC GGTGCTGTCG GTCAACTATA TTGGCGACGG ATTGCGCGAT
GCCCTCGATC CGCGGATACG CGGACGGTAG
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| Protein sequence | MTETSSDIQI SHAPRNQWWD VWDQFRTHKG ALFGLAFFVF SLMFVYLGPL FWTLDSQYID
IRARNTNHIL ACLGVGGGWF SPEGWAAWFR DMPACFASPE EFGRANPIYA LKVSWAHPLG
ADQLGRDTLS RMMVGGQTSI AVGLTAMLLA LFFGTLIGVV AGYFKRVDGL LMRFTDLFLA
MPLLPLLLVI IMLFRDTLRN AFGPEGGIFV LIVVVIGLTS WMQTARVVRG DVLALKEREF
VLAARSIGTP PWRLILRHVL PNVMSSIMVS ATLGIANAII TESALSFLGL GFPSDFPTWG
RLLFDATDWL SQNPERVIWP GLFISLTVLS VNYIGDGLRD ALDPRIRGR
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