| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3294 |
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| Symbol | |
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| ID | 3935767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3348360 |
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| End bp | 3350081 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905667 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_511236 |
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| Protein GI | 89055785 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.207016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA CATCCATTCT TCTGGGGTGC GCCGCCGCGA TGGCCTGCGC CCCCATGGCC
GCGCTGGCCG ACGGGCATCT GTCCCGCGGC GGTTCCGGCC ACCTCAACAT TATCTATTGG
CAAGCGCCCT CAACGCTGAA CCCGTATCTG TCGGGCGGCA CGAAAGAGGT CGAATCCGCC
TCGCTGATCC TGGAAAGCCT GGGTCGCTTT GACGACACCG GCGAGCTGGT CCCATGGCTG
GCCGCCGAGA TTCCGACCGT TGAGAACGGC GGCATCTCCG AGGATCTGAC GCAGATCACC
TGGACGCTGC AGGAAGGCAT CCTGTGGTCC GATGGCACGC CCCTGACGGC GGCGGACGCC
GTGTTCACGT GGGAGTATTG TACCGATTCC GAGAGTGGCT GCGCCCAGGC GTCCTACTTT
GACGGCGTCG AAGCGGTTGA GGCTGTGGAC GACACGACGA TCCAGATCAC GTTCAACGCC
CCCACACCAT TCCCCTACAC CGCGCTGGTC GGCTCCGAGA GCCCAATCAT CCAGGCCGCA
CAATTTGCCG ATTGCGTCGG CGCCCGCGCG CCTGAATGCA CCGAGGCCAA TTTCGGCCCC
ATCGGCACCG GTCCCTTCGT CGTCACGGAC TTCCGTCCCA ACGACGTGAT CGAGCTTGTG
GCCAACGACA ATTACCGTGT GCCCGAGCAG CCCCACTTCG CGTCCGTGAC CTTCAAAGGC
GGCGGCGATG CAACGGCGGC GGCGCGGTCC GTGCTGGAAA CGGGCGAGTT TGACTACGCC
TGGAACCTTC AGATCGACCC GACAATCCTG GCGCAAATGG AAGCGCAGGG GAACGGCACG
GTCGTGACCG CCTTCGGCAC GTCCGTTGAG CGTCTGCACC TGAACCAGAC CAACCCCGAT
GCAGCGCTTG GCGACATGCG CTCCACCGTG GAAGGCGGGC CGCACCCGTT CCTGACCGAT
CCGATCGTGG GTCAGGCGAT GTCCATGGCC ATCGACCGCG CGCTGATCGT GGAAATCGGC
TACGGGGCAG GCGGTCAGCC CACCTGTAAC GTCCTTCCCG CGCCCGAGGC CTATGCCTCC
ACCGCCAACG ATGGCTGCCT TGTGCAGGAC ATCGCCGGTG CCAATGCGCT GCTGGATGAA
GCGGGCCACG TCGACACCGA CGGCGACGGC ATCCGCGAAT ACAACGGTGT TCCGATGACG
GTTCTTTATC AGACCTCGAC CAACGCCGTC CGTCAGGACA CCCAAGCGCT GGTGAAGCAA
TGGTGGGAAG AAATCGGCAT CGGGTCCGAG CTTCGCAACA TCGACGCATC GGTCTTCTTC
GGTGGTGATC CGGCATCGCC CGACACGTTC CAGAAGTTCT ATGCCGACGT CGAAATGTAC
ACCAACAACT TCTCGGGCGT TGACCCGCAG GCGTATATGG CCAACTGGCT CTGCTCGGAC
ATTCCTGGTC CGGACACCCA ATGGCAGGGT GCGAACATCC AGCGCTTCTG TTCCGAGGAC
TATGACGCCC TCGTGGCGGA AATGGCCGGT ACCGCAGACC TGGCCGAGCG GGGCCGTCTG
GCGATGGCAA TGAACGACAT GATCATGCAG TCGTATTCCA TCATCCCGCT GGTCCACCGT
GGCGGCGTGT CGGCCCATGC CAACACTCTG GGCGGTGTGC GGATGTCCGA TTGGGACACC
GAATTGTGGA ACATCGCCGA ATGGCACCGC ATCCCTGAGT GA
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| Protein sequence | MKRTSILLGC AAAMACAPMA ALADGHLSRG GSGHLNIIYW QAPSTLNPYL SGGTKEVESA
SLILESLGRF DDTGELVPWL AAEIPTVENG GISEDLTQIT WTLQEGILWS DGTPLTAADA
VFTWEYCTDS ESGCAQASYF DGVEAVEAVD DTTIQITFNA PTPFPYTALV GSESPIIQAA
QFADCVGARA PECTEANFGP IGTGPFVVTD FRPNDVIELV ANDNYRVPEQ PHFASVTFKG
GGDATAAARS VLETGEFDYA WNLQIDPTIL AQMEAQGNGT VVTAFGTSVE RLHLNQTNPD
AALGDMRSTV EGGPHPFLTD PIVGQAMSMA IDRALIVEIG YGAGGQPTCN VLPAPEAYAS
TANDGCLVQD IAGANALLDE AGHVDTDGDG IREYNGVPMT VLYQTSTNAV RQDTQALVKQ
WWEEIGIGSE LRNIDASVFF GGDPASPDTF QKFYADVEMY TNNFSGVDPQ AYMANWLCSD
IPGPDTQWQG ANIQRFCSED YDALVAEMAG TADLAERGRL AMAMNDMIMQ SYSIIPLVHR
GGVSAHANTL GGVRMSDWDT ELWNIAEWHR IPE
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