| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3260 |
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| Symbol | |
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| ID | 3935733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3311928 |
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| End bp | 3313019 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905633 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_511202 |
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| Protein GI | 89055751 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACCCT TCCCGCATGA CGCCCCAAAA TCCGTGATCG ATGCCTCCAA TGTGGCAGGC
ACCGACGGGT TTGAATTTGT TGAATTCGCC CATCCCAACC CGGCCGAACT GGAGCGCCTG
TTCACCGCGA TGGGCTACGT GGAGGTGGCG CGCCACAAGA TGCGCGACAT CAGCCTCTAC
CGTCAGGGCG ACATCAATTA CATCCTGAAC CGGGAGCCGG ATACCCACGC CGCGCGGTTT
GTGGACGCCC ACGGGCCCTG CGCGCCTGCC ATGGCGTGGC GCTGCGTGGA TGCGGCCCAT
GCGCTGAAAT GCGCGGTCGA TTACGGGGCC GAGGAATACA CCGGTTCGGA CAAGACGCTA
GATGTGCCCG CCGTGGTGGG CATCGGCGGA TCGCTTTTGT ATTTCATCGA CACCTATGGC
GACGACAGCC CCTATACGGC GGAATTCGAC TGGCTGGGCG CGGTCGACCC GAAGCCCGAA
GGTGCCGGGT TCTACTATCT GGATCACCTG ACCCACAACG TGGCGCGGGG GAATATGTCG
ACCTGGTATG ACTTCTACGC CAAGGCCTTC AACTTCAAGG AAATCCGCTT CTTCGATATC
GAGGGCAAGC AGACGGGCCT GTTTTCCCGT GCGCTGACCA GCCCCTGTGG CAAGATCCGC
ATCCCGATCA ACGAGAGCAA GGATGAGACC AGCCAGATCG AGGAATACTT ACACGAATAC
AAGGGCGAAG GCATCCAGCA CATCGCGGTC GCCACGAACG GAATCTACGA CAGTGTCGAC
CAGATCGCGG CCAACGGGAT CGAATTCATG CCGCCGCCGC CCGCCACCTA CTATTACAAG
TCCGGCGCGC GCGTGACGGA TCATCAAGAG CCGCTGGAAC GGATGATGCA GCACGGCATT
CTGATTGACG GCGAAGGGGT AGTTGATGGC GGCACGACGC GTGTGCTGTT GCAGATCTTT
TCCAAGACGG TCATCGGGCC GATCTTCTTC GAGTTCATCC AACGCAAGGG CGACGACGGC
TTCGGTGAGG GCAACTTCAA GGCGCTGTTT GAGAGCATTG AAGAAGATCA GATCCAGCGC
GGTGTGATTT AA
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| Protein sequence | MGPFPHDAPK SVIDASNVAG TDGFEFVEFA HPNPAELERL FTAMGYVEVA RHKMRDISLY
RQGDINYILN REPDTHAARF VDAHGPCAPA MAWRCVDAAH ALKCAVDYGA EEYTGSDKTL
DVPAVVGIGG SLLYFIDTYG DDSPYTAEFD WLGAVDPKPE GAGFYYLDHL THNVARGNMS
TWYDFYAKAF NFKEIRFFDI EGKQTGLFSR ALTSPCGKIR IPINESKDET SQIEEYLHEY
KGEGIQHIAV ATNGIYDSVD QIAANGIEFM PPPPATYYYK SGARVTDHQE PLERMMQHGI
LIDGEGVVDG GTTRVLLQIF SKTVIGPIFF EFIQRKGDDG FGEGNFKALF ESIEEDQIQR
GVI
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