| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3254 |
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| Symbol | |
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| ID | 3935726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3304481 |
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| End bp | 3305044 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637905626 |
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| Product | elongation factor P |
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| Protein accession | YP_511196 |
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| Protein GI | 89055745 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
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| TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.310404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.360922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGAAAA TTAACGGAAA CGAGATCAGG CCGGGCAATG TCCTGGAGCA TAATGGCGGG
CTTTGGGCTG CCGTCAAAGT GGATCATGTG AAACCCGGCA AAGGCGGCGC ATTTGCGCAG
GTCGAGCTGC GCAATCTTCG TAACGGGTCA AAGCTGAACG AACGGTTCAG GTCCGCAGAC
AAAGTGGAGC GTGTTCGACT GGAACAGAAG GACCAGCAAT TCCTGTACGA GAGTGACGGG
ATGCTGGTGT TCATGGATGC CGAAACCTAT GAGCAGATCG AACTGCCCGC TGAACTGCTG
GGTGAGCGGC GTCCTTTCCT GCAGGACGGC ATGACCATCG TGGTGGAATT CCATGACGAT
GAGGCGCTGA ACGCGTCGCT GCCCCAGAAG GTCGTATGCA AAGTCGTGGA GACGGAACCT
GTCGTGAAGG GCCAGACGGC GGCCAATTCC TTCAAGCCCG CGATCCTCGA CAACGGTGTG
AAGGTCATGG TGCCTCCATT CGTGGGTCAG GATGAGGACA TTGTCGTCAA TACGGAAACG
ATGGATTATT CCGAGCGCGC CTGA
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| Protein sequence | MPKINGNEIR PGNVLEHNGG LWAAVKVDHV KPGKGGAFAQ VELRNLRNGS KLNERFRSAD
KVERVRLEQK DQQFLYESDG MLVFMDAETY EQIELPAELL GERRPFLQDG MTIVVEFHDD
EALNASLPQK VVCKVVETEP VVKGQTAANS FKPAILDNGV KVMVPPFVGQ DEDIVVNTET
MDYSERA
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