| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3251 |
|---|
| Symbol | |
|---|
| ID | 3935723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 3301568 |
|---|
| End bp | 3302440 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637905623 |
|---|
| Product | cobalamin synthesis protein, P47K |
|---|
| Protein accession | YP_511193 |
|---|
| Protein GI | 89055742 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.784399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.367551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCCC TGCCGTTGAC AGTGGTGGCG GGATATTTGG GTGCCGGAAA GACCACGTTT
ATCAATCGCT TGCTGGCAGG AGACCACAGG CTGCGCCTGA TGGTACTGGT CAACGATTTC
GGCGCGATCA ACATCGACGC GGGCCTGATC GCATTGGCAG ACGGTGACAC CATCGCGCTG
ACCAACGGCT GCGTTTGCTG CACCATGGGT GCGGACTTGT TCATGGCATT GGGCGACGCG
CTGGATCGCC GACCGCGCCC CGACCACCTG ATCGTAGAAG CCAGCGGCGT GGCTGATCCT
GCACGCATCG CGAACGCGGC CCTGGCCGAG CCGGATCTGG CTTACGGGGG GATCGTGACA
ATCGTGGACG GGCAGCAAAT CGACGGGCTA TGCGCGGATC CGATGATCGG AGCGCAGGTC
CGCGATCAGA TCGCCTGCGC GGATCTGGTG GTGGTCAGCA AGGTCTGCGA GCTATCCGCC
GTATTGGCCG CCACTCTCAC CACCCTATCG GGCGCGAGTG TTCTCTTGTC AGCGGACGTG
ACAGACCCCG CGACGTTGTT ATGCGCGGCA CCGAAACCGA CGCCTGCCTC AGCGCCCCAT
CCGGATTACC AAAGTTGGTC CTACACCGGA GACGCGACGC TGCACCGTGA GGTCCTTTCC
CAGTCTGTCG CCAAGCGCCC TCAGGCCCTC TTTCGCCTCA AGGGACACGT CATGGACCCG
AACGGTGGCG CGTGGGAGGT TCACGCGGTG GGGCGGCACG TCTCGGTCAC CCAGGCCGCG
CCGCAATCGC ACACGCAGTT GGTCGCCATA GGACTGAAAT CCCTTGTAAA AAAAGATGAC
GTCGACGCGT GGTGGCAATC CGCAACGGCT TAG
|
|---|
| Protein sequence | MMPLPLTVVA GYLGAGKTTF INRLLAGDHR LRLMVLVNDF GAINIDAGLI ALADGDTIAL
TNGCVCCTMG ADLFMALGDA LDRRPRPDHL IVEASGVADP ARIANAALAE PDLAYGGIVT
IVDGQQIDGL CADPMIGAQV RDQIACADLV VVSKVCELSA VLAATLTTLS GASVLLSADV
TDPATLLCAA PKPTPASAPH PDYQSWSYTG DATLHREVLS QSVAKRPQAL FRLKGHVMDP
NGGAWEVHAV GRHVSVTQAA PQSHTQLVAI GLKSLVKKDD VDAWWQSATA
|
|---|
| |